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rifcsplowo2_01_scaffold_7630

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_7630_1
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

Not on your lists

comp(1..744)
DNA (744bp) protein (248aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K03660 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] Tax=GWB2_Planctomycetes_41_19_curated
Similar to 8-oxoguanine glycosylase (Hogg1) id=4795187 bin=GWC2_Planctomycete_KSU_39_26 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hypothetical protein
rifcsplowo2_01_scaffold_7630_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

834..1517
DNA (684bp) protein (228aa)
family 2 glycosyl transferase Tax=RBG_13_Woesearchaeota_36_6_curated
Putative dolichyl-phosphate mannose synthase id=5800086 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
family 2 glycosyl transferase
rifcsplowo2_01_scaffold_7630_3
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

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1597..1923
DNA (327bp) protein (109aa)
Uncharacterized protein MJ1580 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=Y1580_METJA
hypothetical protein; K09153 hypothetical protein Tax=RBG_13_RIF_OD1_08_37_53_curated
hypothetical protein
rifcsplowo2_01_scaffold_7630_4
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

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1928..3022
DNA (1095bp) protein (365aa)
group 1 glycosyl transferase id=5096638 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
Group 1 glycosyl transferase {ECO:0000313|EMBL:KKR24056.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
hypothetical protein
rifcsplowo2_01_scaffold_7630_5

Not on your lists

3019..4110
DNA (1092bp) protein (364aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL67163.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Glycosyl transferase, group 1 id=2882452 bin=GWF2_OP3_43_52 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
glycosyl transferases group 1 family protein
rifcsplowo2_01_scaffold_7630_6
R_PER_ii_55_13, PER-ii, Bacteria

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4107..5426
DNA (1320bp) protein (440aa)
Capsular polysaccharide biosynthesis protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBX9_METEZ
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_PER_ii_55_13_curated
capsular polysaccharide biosynthesis protein
rifcsplowo2_01_scaffold_7630_7
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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5426..6964
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036643BD
hypothetical protein
hypothetical protein Tax=RBG_16_Planctomycetes_55_9_curated
rifcsplowo2_01_scaffold_7630_8
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7066..8088
DNA (1023bp) protein (341aa)
Putative glycosyltransferase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PV68_METMA
glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:AAM31802.1}; TaxID=192952 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarci
rifcsplowo2_01_scaffold_7630_9
unknown

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8085..8909
DNA (825bp) protein (275aa)

This feature has no annotations

rifcsplowo2_01_scaffold_7630_10
R_OD1_58_14, Parcubacteria, Bacteria

Not on your lists

comp(8892..9695)
DNA (804bp) protein (268aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RIFCSPLOWO2_01_FULL_OD1_58_14_curated
rbfA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
rbfA; glucose-1-phosphate thymidylyltransferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] id=5241080 bin=GW2011_AR10_complete species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_7630_11
RBG_19FT_COMBO_Actinobacteria_36_27_curated, Actinobacteria, Bacteria

Not on your lists

comp(9744..10916)
DNA (1173bp) protein (391aa)
putative dehydrogenase Tax=RBG_19FT_COMBO_Actinobacteria_36_27_curated
2-hydroxyglutarate dehydrogenase id=1697515 bin=GWA2__Bacteriovorax-rel_49_15 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
FAD dependent oxidoreductase
rifcsplowo2_01_scaffold_7630_12
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

11003..11974
DNA (972bp) protein (324aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
dTDP-glucose 4,6-dehydratase n=1 Tax=Paenibacillus polymyxa (strain SC2) RepID=E3EAK8_PAEPS
dtdp-d-glucose 4,6-dehydratase, rfbb
rifcsplowo2_01_scaffold_7630_13
R_Peregrinibacteria_48_14, Peregrinibacteria, Bacteria

Not on your lists

11971..12828
DNA (858bp) protein (286aa)
hypothetical protein; K12451 3,5-epimerase/4-reductase [EC:5.1.3.- 1.1.1.-] id=31804 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
similar to dTDP-4-dehydrorhamnose reductase Tax=RIFCSPLOWO2_02_FULL_Peregrinibacteria_48_14_curated
dTDP-4-dehydrorhamnose reductase
rifcsplowo2_01_scaffold_7630_14

Not on your lists

12934..13878
DNA (945bp) protein (315aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO47131.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
Uncharacterized protein id=3587596 bin=GWF2_Ignavibacteria_35_20 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
rifcsplowo2_01_scaffold_7630_15

Not on your lists

comp(13829..15349)
DNA (1521bp) protein (507aa)
polysaccharide biosynthesis protein CapF id=5045889 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Polysaccharide biosynthesis protein CapF {ECO:0000313|EMBL:KHO46234.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
polysaccharide biosynthesis protein
rifcsplowo2_01_scaffold_7630_16
R_OD1_Magasanikbacteria_47_16, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

15576..16031
DNA (456bp) protein (152aa)
UDP-glucose/GDP-mannose dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RIFCSPLOWO2_02_FULL_OD1_Magasanikbacteria_47_16_curated
rca:Rcas_3421 UDP-glucose/GDP-mannose dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] id=13368 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
UDP-glucose/GDP-mannose dehydrogenase
Displaying 16 items

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