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rifcsplowo2_01_scaffold_9503

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_9503_1
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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474..1253
DNA (780bp) protein (260aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601, ECO:0000313|EMBL:GAN32356.1}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1197129 species="Bacteria; Planctomyc
Ribosomal RNA small subunit methyltransferase E id=4789757 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
RsmE family RNA methyltransferase
rifcsplowo2_01_scaffold_9503_2
unknown

Not on your lists

1264..1368
DNA (105bp) protein (35aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9503_3
AR15, Woesearchaeaota, DPANN, Archaea

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1480..1752
DNA (273bp) protein (91aa)
DNA-directed RNA polymerase subunit L id=5799914 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit L Tax=AR15
DNA-directed RNA polymerase subunit L
rifcsplowo2_01_scaffold_9503_4
unknown

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comp(1745..2044)
DNA (300bp) protein (100aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9503_5

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2112..2591
DNA (480bp) protein (160aa)
id=5041897 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47325.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsplowo2_01_scaffold_9503_6

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2680..3405
DNA (726bp) protein (242aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] id=5048456 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synt
Tritrans,polycis-undecaprenyl-diphosphate synthase, geranylgeranyl-diphosphate specific
rifcsplowo2_01_scaffold_9503_7
unknown

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comp(3406..3498)
DNA (93bp) protein (31aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9503_8
R_Gammaproteobacteria_42_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3502..4269)
DNA (768bp) protein (256aa)
arsenite S-adenosylmethyltransferase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B4F6E5
putative methyltransferase Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_42_13_curated
type 11 methyltransferase
rifcsplowo2_01_scaffold_9503_9
AR11, Woesearchaeaota, DPANN, Archaea

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comp(4271..4567)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003760270
hypothetical protein; K08982 putative membrane protein Tax=AR11
hypothetical protein
rifcsplowo2_01_scaffold_9503_10
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(4573..5151)
DNA (579bp) protein (193aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
hypothetical protein id=5041717 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_9503_11
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(5148..5471)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B1A68
regulatory protein ArsR Tax=CG_Pacearch_05
regulatory protein ArsR
rifcsplowo2_01_scaffold_9503_12
CG_Pacearch_05, Pacearchaeota, Archaea

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6270..6479
DNA (210bp) protein (70aa)
Transcription regulator AbrB/SpoV, predicted id=5041671 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=CG_Pacearch_05
rifcsplowo2_01_scaffold_9503_13
CG_Pacearch_05, Pacearchaeota, Archaea

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6479..6841
DNA (363bp) protein (121aa)
PIN domain-containing protein Tax=CG_Pacearch_05
Putative PIN domain protein id=5041670 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
PIN protein
rifcsplowo2_01_scaffold_9503_14

Not on your lists


6947..7723
DNA (777bp) protein (259aa)
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5047524 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L1 {ECO:0000313|EMBL:KHO45733.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L1
rifcsplowo2_01_scaffold_9503_15
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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7720..8616
DNA (897bp) protein (299aa)
50S ribosomal protein L10 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVQ4_9EURY
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Therm
rplP0; acidic ribosomal protein P0
rifcsplowo2_01_scaffold_9503_16

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8717..9025
DNA (309bp) protein (103aa)
50S ribosomal protein L12 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WM01_9EURY
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
50S ribosomal protein L12P
rifcsplowo2_01_scaffold_9503_17

Not on your lists

9108..9929
DNA (822bp) protein (274aa)
Uncharacterized protein (Fragment) id=5800444 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61775.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsplowo2_01_scaffold_9503_18
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(10143..10469)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VWU3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ENO12384.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
rifcsplowo2_01_scaffold_9503_19
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(10534..12945)
DNA (2412bp) protein (804aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
Phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AE3_METBF
rifcsplowo2_01_scaffold_9503_20
unknown

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comp(12994..13458)
DNA (465bp) protein (155aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9503_21
unknown

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comp(13465..13986)
DNA (522bp) protein (174aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9503_22
CG_Pacearch_03, Pacearchaeota, Archaea

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comp(14194..14574)
DNA (381bp) protein (127aa)
hypothetical protein Tax=CG_Pacearch_03
rifcsplowo2_01_scaffold_9503_23
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14589..15521)
DNA (933bp) protein (311aa)
Putative uncharacterized protein id=5800161 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Putative uncharacterized protein Tax=AR15
rifcsplowo2_01_scaffold_9503_24
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(15559..16788)
DNA (1230bp) protein (410aa)
tRNA nucleotidyltransferase (CCA-adding enzyme) id=5799810 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA nucleotidyltransferase (CCA-adding enzyme) Tax=AR15
tRNA nucleotidyltransferase CCA-adding enzyme
rifcsplowo2_01_scaffold_9503_25
unknown

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16900..17217
DNA (318bp) protein (106aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9503_26

Not on your lists

17243..18358
DNA (1116bp) protein (372aa)
Cation/H+ exchanger n=1 Tax=sediment metagenome RepID=D9PM41_9ZZZZ
Cation/H+ exchanger {ECO:0000313|EMBL:EFK95397.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
rifcsplowo2_01_scaffold_9503_27

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18321..18704
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PM40_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:EFK95396.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
rifcsplowo2_01_scaffold_9503_28

Not on your lists


18850..19449
DNA (600bp) protein (200aa)
DNA-directed RNA polymerase {ECO:0000313|EMBL:EFK95395.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EFK95395.1};; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sedim
DNA-directed RNA polymerase n=1 Tax=sediment metagenome RepID=D9PM39_9ZZZZ
DNA-directed RNA polymerase subunit E
rifcsplowo2_01_scaffold_9503_29

Not on your lists

19729..20028
DNA (300bp) protein (100aa)
30S ribosomal protein S24e n=1 Tax=sediment metagenome RepID=D9PM37_9ZZZZ
30S ribosomal protein S24e {ECO:0000313|EMBL:EFK95393.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
ribosomal protein S24e
rifcsplowo2_01_scaffold_9503_30
RIFOXYC1_FULL_Bdellovibrionales_37_79_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

20311..20817
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YJZ3_9BACT
alpha/beta-Hydrolases 1..157 Tax=RIFOXYC1_FULL_Bdellovibrionales_37_79_curated
Displaying items 1-30 of 39 in total

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