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rifcsplowo2_01_scaffold_1784

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_1784_1

Not on your lists

2..283
DNA (282bp) protein (94aa)
hypothetical protein
id=5103856 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF63134.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_1784_2
Methylophaga thiooxydans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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738..1121
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N3V3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGM06492.1}; TaxID=392484 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga thi
hypothetical protein
rifcsplowo2_01_scaffold_1784_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(1202..3265)
DNA (2064bp) protein (688aa)
threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=CG_Woesearch_02
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LW80_TEPAE
rifcsplowo2_01_scaffold_1784_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(3237..3989)
DNA (753bp) protein (251aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
Putative membrane-associated protein/domain protein id=5799953 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_1784_5
CG_Woesearch_01, Woesearchaeota, Archaea

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4255..5331
DNA (1077bp) protein (359aa)
hypothetical protein Tax=CG_Woesearch_01
rifcsplowo2_01_scaffold_1784_6
unknown

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5587..5802
DNA (216bp) protein (72aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1784_7
unknown

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5835..6143
DNA (309bp) protein (103aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1784_8
unknown

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comp(6040..6279)
DNA (240bp) protein (80aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1784_9
CG_Woesearch_02, Woesearchaeota, Archaea

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6351..6824
DNA (474bp) protein (158aa)
hypothetical protein
seg Tax=CG_Woesearch_02
seg id=5041657 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_1784_10
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(6817..7092)
DNA (276bp) protein (92aa)
Uncharacterized small membrane protein id=3360594 bin=GWF2_Planctomycetes_42_9 species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
small membrane protein Tax=GWF2_Planctomycetes_42_9_curated
uncharacterized small membrane protein
rifcsplowo2_01_scaffold_1784_11
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(7089..7775)
DNA (687bp) protein (229aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacter
Pseudouridine synthase n=2 Tax=Caldanaerobacter subterraneus RepID=Q8R5S6_THETN
RsuA2; 16S rRNA uridine-516 pseudouridylate synthase
rifcsplowo2_01_scaffold_1784_12
GWB1_OP11_38_8, Woesebacteria, Microgenomates, Bacteria

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7920..8147
DNA (228bp) protein (76aa)
cold-shock protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003672520
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:KKQ84172.1}; TaxID=1618570 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_38_8.;"
cold-shock DNA-binding domain-containing protein
rifcsplowo2_01_scaffold_1784_13
CG_Woesearch_02, Woesearchaeota, Archaea

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8288..9445
DNA (1158bp) protein (386aa)
hypothetical protein Tax=CG_Woesearch_02
Methylase id=5799699 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_1784_14
unknown

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9435..9749
DNA (315bp) protein (105aa)
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) RepID=A6VI58_METM7 id=5103637 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) RepID=A6VI58_METM7 Tax=AR20
cysteine methyltransferase
rifcsplowo2_01_scaffold_1784_15
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(9956..10924)
DNA (969bp) protein (323aa)
tfb; transcription initiation factor IIB; K03124 transcription initiation factor TFIIB Tax=CG_Woesearch_03
transcription factor tFIIB cyclin-like protein; K03124 transcription initiation factor TFIIB id=5043581 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcription initiation factor IIB
rifcsplowo2_01_scaffold_1784_16
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(11000..12328)
DNA (1329bp) protein (443aa)
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 Tax=AR9
Signal recognition particle 54 kDa protein id=5800735 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SRP54-type protein, GTPase protein
rifcsplowo2_01_scaffold_1784_17
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12334..12600)
DNA (267bp) protein (89aa)
hypothetical protein id=5043706 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=AR4
hypothetical protein
rifcsplowo2_01_scaffold_1784_18
unknown

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12833..13720
DNA (888bp) protein (296aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1784_19
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13722..15149)
DNA (1428bp) protein (476aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=AR9
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ19_NITGG
rifcsplowo2_01_scaffold_1784_20
unknown

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comp(15314..15688)
DNA (375bp) protein (125aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1784_21
unknown

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comp(15673..15864)
DNA (192bp) protein (64aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1784_22
unknown

Not on your lists

comp(15861..16076)
DNA (216bp) protein (72aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1784_23
unknown

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comp(16090..16467)
DNA (378bp) protein (126aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1784_24
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16480..17352)
DNA (873bp) protein (291aa)
amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=AR4
amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein id=5041722 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_1784_25
unknown

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17557..17811
DNA (255bp) protein (85aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1784_26
unknown

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17824..18306
DNA (483bp) protein (161aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1784_27
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(18387..18959)
DNA (573bp) protein (191aa)
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein id=5049606 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_1784_28
AR15, Woesearchaeaota, DPANN, Archaea

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19014..20264
DNA (1251bp) protein (417aa)
Translation initiation factor 2 subunit gamma id=5800779 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Translation initiation factor 2 subunit gamma Tax=AR15
Translation initiation factor 2 subunit gamma
rifcsplowo2_01_scaffold_1784_29
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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20287..20868
DNA (582bp) protein (194aa)
Putative hydrolase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67QA4_SYMTH
hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
hydrolase
rifcsplowo2_01_scaffold_1784_30
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(20845..21261)
DNA (417bp) protein (139aa)
Bis(5'-nucleosyl)-tetraphosphatase Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
NUDIX hydrolase id=14427390 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
NUDIX hydrolase
Displaying items 1-30 of 56 in total

View Taxonomy