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rifcsplowo2_01_scaffold_16027

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_16027_1
unknown

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1..99
DNA (99bp) protein (33aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16027_2
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(179..562)
DNA (384bp) protein (128aa)
Transposase IS200-family protein n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RBM0_AMMDK
transposase IS200-family protein
Transposase IS200-family protein {ECO:0000313|EMBL:ACX51647.1}; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" so
rifcsplowo2_01_scaffold_16027_3
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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615..1763
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000380B0B1
transposase
Tax=BJP_IG2158_Thermoplasmatales_53_16
rifcsplowo2_01_scaffold_16027_4
zPERA2_38_36, Peregrinibacteria, Bacteria

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1826..3154
DNA (1329bp) protein (443aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase / phosphoribosylamine--glycine ligase (EC:6.3.2.6); K13713 fusion protein PurCD [EC:6.3.2.6 6.3.4.13] id=5802652 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
Phosphoribosylaminoimidazole-succinocarboxamide synthase Tax=zPERA2_38_36
phosphoribosylamine/glycine ligase
rifcsplowo2_01_scaffold_16027_5
R_OP11_Gottesmanbacteria_46_14, Gottesmanbacteria, Microgenomates, Bacteria

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3151..3609
DNA (459bp) protein (153aa)
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] Tax=RIFCSPHIGHO2_01_FULL_OP11_Gottesmanbacteria_46_14_curated
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X728_9PORP
5-formyltetrahydrofolate cyclo-ligase
rifcsplowo2_01_scaffold_16027_6
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3593..4426
DNA (834bp) protein (278aa)
Bifunctional protein FolD n=2 Tax=Brevibacillus laterosporus RepID=F7U125_BRELA
folD; bifunctional protein FolD protein FolD
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1042163 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus laterosporus LMG
rifcsplowo2_01_scaffold_16027_7

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4416..7346
DNA (2931bp) protein (977aa)
Phosphoribosylformylglycinamidine synthase II; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] id=5045878 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
purL; phosphoribosylformylglycinamidine synthase II
rifcsplowo2_01_scaffold_16027_8

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7606..8355
DNA (750bp) protein (250aa)
phosphoribosylformylglycinamidine synthase I; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] id=5045877 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421};; Formyl
purQ; phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3)
rifcsplowo2_01_scaffold_16027_9
unknown

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8336..8746
DNA (411bp) protein (137aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16027_10

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8778..10472
DNA (1695bp) protein (565aa)
RDD domain-containing protein id=5045920 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
RDD protein {ECO:0000313|EMBL:KHO46265.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
RDD domain-containing protein
rifcsplowo2_01_scaffold_16027_11
GWA2_PER_47_7, Peregrinibacteria, Bacteria

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10535..13225
DNA (2691bp) protein (897aa)
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] id=5091268 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase Tax=GWA2_PER_47_7
rifcsplowo2_01_scaffold_16027_12
unknown

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comp(13143..13526)
DNA (384bp) protein (128aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16027_13

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13609..14568
DNA (960bp) protein (320aa)
fumarate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] id=5045869 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Adenylosuccinate lyase {ECO:0000313|EMBL:KHO46482.1}; EC=4.3.2.2 {ECO:0000313|EMBL:KHO46482.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
fumarate lyase
rifcsplowo2_01_scaffold_16027_14
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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14561..15697
DNA (1137bp) protein (379aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00
Adenylosuccinate synthetase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=PURA_GEOLS
rifcsplowo2_01_scaffold_16027_15
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(15659..16660)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035F75AC
Transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein Tax=CG_Woesearch_03
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
rifcsplowo2_01_scaffold_16027_16
CG_Micra_04, Micraarchaeota, Archaea

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16770..17273
DNA (504bp) protein (168aa)
asparaginyl-tRNA synthetase Tax=CG_Micra_04
Displaying 16 items

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