ggKbase home page

rifcsplowo2_01_scaffold_4814_15

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_41_36

near complete RP 34 / 55 MC: 5 BSCG 6 / 51 ASCG 33 / 38 MC: 3
Location: comp(15266..16207)

Top 3 Functional Annotations

Value Algorithm Source
Replication factor C small subunit, replication factor C small subunit {ECO:0000313|EMBL:KHO50213.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 308.0
  • Bit_score: 425
  • Evalue 5.40e-116
rfc; replication factor C small subunit; K04801 replication factor C small subunit id=5046355 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 309.0
  • Bit_score: 422
  • Evalue 4.20e-115
Replication factor C small subunit similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 307.0
  • Bit_score: 361
  • Evalue 3.30e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR9 → Archaea

Sequences

DNA sequence
Length: 942
ATGTGGACAGAAAAGTATCGTCCTTCGACGTTTGATGGCGTTCGTGGGCATGATAACATCGTTCAAAGGATAAAAGGCTTCGTTGAACAGAAAAACATGCCTCACCTGTTGTTTTCAGGTCCGGCAGGCGTCGGCAAAACCTCATTATCTCTTGTCATTGCGCGCAGTTTTTACGGCGATGACTGGAAACAGAATTTTCTTGAATTAAACGGTAGTGACGAGCGTGGTATCGACGTTATCCGTGTCAAAGTAAAGGATTTTGCACGCACCCGTTCGATTGGTGACATCCCGTTTAAAATCATTTATCTCGATGAAAGCGACGCATTGACGCGCGAAGCACAGCAGGCGTTACGCAGGACAATGGAGCGTTATACAAAGACTGCGAGATTTATTCTTTCGGTAAATTATAGCAGCAAAATCATCGACCCGATACAGAGCAGATGTGCGGTGTTTCATTTCAAGCCCTTAAAGAAAGAGGACATGGTGTTAATCATCAACAACATTGCACAGCGCGAGCAGTTAGAAATAGCTCCCGATGCGATTGACGCATTGTACGAAATCTCCGGCGGCGACTGTCGTCGTGTTGAAAACATCCTTCAAAGCACTGCGGTGTTAGAAAAAAAGATTACAGTAGAAAGCATTTACTCAATCGCATCAAGCGCACATCCAAAAGAAGTGCTTTCCATTCTTGAATTAGCGTCTTCTCACAAATTCGTTGAGGCACGCGCACAGCTTCTCAAAACGATGCTTGAGCATGGCATGAGCGGTCTGGATATCATCAAATCAATTCAAAGAGAAATCTGGAACATGCACGTCCCCGATAAAAATAAAGTCGACCTCATCGAAAAATGTGGCGAAATAGAATTTCGGATGACTGAAGGCAGTGACGAGTTTGTACAGTTGGAAGCTTTTTTGGCTGCGGTTACCTCAAGCTCTCTCTAA
PROTEIN sequence
Length: 314
MWTEKYRPSTFDGVRGHDNIVQRIKGFVEQKNMPHLLFSGPAGVGKTSLSLVIARSFYGDDWKQNFLELNGSDERGIDVIRVKVKDFARTRSIGDIPFKIIYLDESDALTREAQQALRRTMERYTKTARFILSVNYSSKIIDPIQSRCAVFHFKPLKKEDMVLIINNIAQREQLEIAPDAIDALYEISGGDCRRVENILQSTAVLEKKITVESIYSIASSAHPKEVLSILELASSHKFVEARAQLLKTMLEHGMSGLDIIKSIQREIWNMHVPDKNKVDLIEKCGEIEFRMTEGSDEFVQLEAFLAAVTSSSL*