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rifcsplowo2_01_scaffold_14044

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_14044_1
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1..108)
DNA (108bp) protein (36aa)
hypothetical protein id=5045958 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=AR4
hypothetical protein
rifcsplowo2_01_scaffold_14044_2
unknown

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comp(183..476)
DNA (294bp) protein (98aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14044_3
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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552..2261
DNA (1710bp) protein (570aa)
ATP-dependent DNA ligase (EC:6.5.1.1) Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
ATP-dependent DNA ligase (EC:6.5.1.1)
DNA ligase 2 n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=DNLI2_THEPD
rifcsplowo2_01_scaffold_14044_4
unknown

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comp(2287..2685)
DNA (399bp) protein (133aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14044_5
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3417..5708)
DNA (2292bp) protein (764aa)
AAA family ATPase, CDC48 subfamily id=5799990 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
AAA family ATPase, CDC48 subfamily Tax=AR15
AAA family ATPase, CDC48 subfamily
rifcsplowo2_01_scaffold_14044_6
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(5818..6759)
DNA (942bp) protein (314aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RDP0_9PLAN
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EMI17500.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.
type I phosphodiesterase/nucleotide pyrophosphatase
rifcsplowo2_01_scaffold_14044_7
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6843..7265)
DNA (423bp) protein (141aa)
hypothetical protein
Uncharacterized protein Tax=AR9
hypothetical protein id=5042289 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_14044_8
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(7311..8333)
DNA (1023bp) protein (341aa)
putative deoxyhypusine synthase (EC:2.5.1.46); K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
deoxyhypusine synthase (EC:2.5.1.46); K00809 deoxyhypusine synthase [EC:2.5.1.46] id=5042117 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
deoxyhypusine synthase
rifcsplowo2_01_scaffold_14044_9

Not on your lists

8557..8877
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003769C5D
Marine sediment metagenome DNA, contig: S06H3_L01394 {ECO:0000313|EMBL:GAI03956.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
molecular chaperone DnaJ
rifcsplowo2_01_scaffold_14044_10
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8931..9737
DNA (807bp) protein (269aa)
hydrolase, tatd family; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
Hydrolase, TatD family id=5800627 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Hydrolase, TatD family
rifcsplowo2_01_scaffold_14044_11
unknown

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comp(9716..10330)
DNA (615bp) protein (205aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14044_12
CG_Micra_06, Micraarchaeota, Archaea

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comp(10525..10773)
DNA (249bp) protein (83aa)
Protein containing Nucleotide binding protein, PINc domain n=1 Tax=sediment metagenome RepID=D9PJC5_9ZZZZ id=5103634 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protein containing Nucleotide binding protein, PINc protein
Protein containing Nucleotide binding protein, PINc domain Tax=CG_Micra_06
rifcsplowo2_01_scaffold_14044_13

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comp(10764..10994)
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PJC6_9ZZZZ id=5103633 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62914.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_14044_14
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11036..12187)
DNA (1152bp) protein (384aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsplowo2_01_scaffold_14044_15
unknown

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comp(12212..12502)
DNA (291bp) protein (97aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14044_16
unknown

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comp(12504..13142)
DNA (639bp) protein (213aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14044_17
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

13159..13428
DNA (270bp) protein (90aa)
RNA polymerase dimerization; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] Tax=AR9
RNA polymerase dimerization; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] id=5044918 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase subunit L
rifcsplowo2_01_scaffold_14044_18
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

13799..14038
DNA (240bp) protein (80aa)
hypothetical protein; K00992 [EC:2.7.7.-] Tax=AR9
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B8391
hypothetical protein
rifcsplowo2_01_scaffold_14044_19
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

14041..14601
DNA (561bp) protein (187aa)
hypothetical protein; K00992 [EC:2.7.7.-] Tax=AR9
hypothetical protein; K00992 [EC:2.7.7.-] id=5050202 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Displaying 19 items

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