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rifcsplowo2_01_scaffold_21460

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_21460_1
unknown

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comp(2..523)
DNA (522bp) protein (174aa)

This feature has no annotations

rifcsplowo2_01_scaffold_21460_2
AR9, Woesearchaeaota, DPANN, Archaea

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comp(523..1089)
DNA (567bp) protein (189aa)
Tax=AR9
rifcsplowo2_01_scaffold_21460_3
unknown

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comp(1424..1570)
DNA (147bp) protein (49aa)

This feature has no annotations

rifcsplowo2_01_scaffold_21460_4
unknown

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comp(1567..1728)
DNA (162bp) protein (54aa)

This feature has no annotations

rifcsplowo2_01_scaffold_21460_5

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1826..2272
DNA (447bp) protein (149aa)
Small subunit ribosomal protein S19e {ECO:0000313|EMBL:KHO49523.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
30S ribosomal protein S19; K02966 small subunit ribosomal protein S19e id=5049179 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rps19E; 30S ribosomal protein S19e
rifcsplowo2_01_scaffold_21460_6
AR9, Woesearchaeaota, DPANN, Archaea

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2645..3034
DNA (390bp) protein (130aa)
50S ribosomal protein L31e; K02910 large subunit ribosomal protein L31e Tax=AR9
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e id=5049181 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal protein L31e
rifcsplowo2_01_scaffold_21460_7
unknown

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3038..3400
DNA (363bp) protein (121aa)

This feature has no annotations

rifcsplowo2_01_scaffold_21460_8

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3420..3623
DNA (204bp) protein (68aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B n=13 Tax=Thermococcaceae RepID=TRUB_PYRFU id=5103295 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative tRNA pseudouridine synthase B
rifcsplowo2_01_scaffold_21460_9
AR9, Woesearchaeaota, DPANN, Archaea

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3729..4373
DNA (645bp) protein (215aa)
truB; H/ACA RNA-protein complex component Cbf5p; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Tax=AR9
truB; pseudouridine synthase B (EC:4.2.1.70)
Probable tRNA pseudouridine synthase B n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GGL3_METTF
rifcsplowo2_01_scaffold_21460_10
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(4370..5188)
DNA (819bp) protein (273aa)
calcineurin-like phosphoesterase Tax=CG_Woesearch_02
metallophosphoesterase id=31198 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
calcineurin-like phosphoesterase
rifcsplowo2_01_scaffold_21460_11
AR9, Woesearchaeaota, DPANN, Archaea

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comp(5337..5933)
DNA (597bp) protein (199aa)
metallophosphoesterase; K07096 Tax=AR9
metallophosphoesterase; K07096 id=5050977 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Metallophosphoesterase
rifcsplowo2_01_scaffold_21460_12
AR9, Woesearchaeaota, DPANN, Archaea

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comp(5956..6705)
DNA (750bp) protein (250aa)
SSU ribosomal protein s3ae; K02984 small subunit ribosomal protein S3Ae Tax=AR9
Ribosomal protein S3AE id=5799806 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SSU ribosomal protein S3AE
rifcsplowo2_01_scaffold_21460_13
unknown

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7195..7593
DNA (399bp) protein (133aa)

This feature has no annotations

rifcsplowo2_01_scaffold_21460_14
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

7605..8396
DNA (792bp) protein (264aa)
hypothetical protein; K07008 glutamine amidotransferase Tax=AR9
rifcsplowo2_01_scaffold_21460_15

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8401..8649
DNA (249bp) protein (83aa)
Glutaredoxin-like protein, YruB-family n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LSR8_CLOCD
Uncharacterized protein {ECO:0000313|EMBL:KHO49062.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Glutaredoxin-like protein, YruB-family
rifcsplowo2_01_scaffold_21460_16
Virgibacillus sp. Vm-5, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8600..8833)
DNA (234bp) protein (78aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
gpsA; glycerol-3-phosphate dehydrogenase GpsA (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Virgibacillus sp. CM-4 RepID=T0J533_9BACI
Displaying 16 items

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