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rifcsplowo2_01_scaffold_7173

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_7173_1
unknown

Not on your lists

comp(2..148)
DNA (147bp) protein (49aa)

This feature has no annotations

rifcsplowo2_01_scaffold_7173_2

Not on your lists

comp(200..1180)
DNA (981bp) protein (327aa)
Transcriptional regulator
Transcription regulator TrmB, N-terminal id=5041732 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47984.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsplowo2_01_scaffold_7173_3
unknown

Not on your lists

1309..1884
DNA (576bp) protein (192aa)

This feature has no annotations

rifcsplowo2_01_scaffold_7173_4

Not on your lists

comp(1915..2121)
DNA (207bp) protein (69aa)
id=5045887 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46232.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_7173_5
R_OD1_Yanofskybacteria_39_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(2118..3290)
DNA (1173bp) protein (391aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_39_10_curated
hypothetical protein id=5045886 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_7173_6
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3493..5712)
DNA (2220bp) protein (740aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] id=5041922 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=AR4
hypothetical protein
rifcsplowo2_01_scaffold_7173_7
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5709..6038)
DNA (330bp) protein (110aa)
putative transcriptional regulator Tax=AR9
ArsR family transcriptional regulator id=5044094 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
transcriptional regulator
rifcsplowo2_01_scaffold_7173_8
unknown

Not on your lists

6074..7714
DNA (1641bp) protein (547aa)

This feature has no annotations

rifcsplowo2_01_scaffold_7173_9
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7867..8409)
DNA (543bp) protein (181aa)
HEPN id=5041660 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
HEPN Tax=AR4
rifcsplowo2_01_scaffold_7173_10
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8397..9038)
DNA (642bp) protein (214aa)
DNA polymerase beta domain-containing protein region id=5041659 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA polymerase beta domain-containing protein region Tax=AR4
DNA polymerase beta domain-containing protein region
rifcsplowo2_01_scaffold_7173_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(9115..11439)
DNA (2325bp) protein (775aa)
UPI0003D1C796 related cluster n=1 Tax=unknown RepID=UPI0003D1C796
subtilisin-like serine protease Tax=CG_Woesearch_02
Ig family protein
rifcsplowo2_01_scaffold_7173_12

Not on your lists

comp(11474..12514)
DNA (1041bp) protein (347aa)
UPI0003D1A86A related cluster n=1 Tax=unknown RepID=UPI0003D1A86A
EF hand domain/PKD protein {ECO:0000313|EMBL:KHO50140.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
subtilisin-like serine protease
rifcsplowo2_01_scaffold_7173_13
unknown

Not on your lists

13172..14173
DNA (1002bp) protein (334aa)

This feature has no annotations

rifcsplowo2_01_scaffold_7173_14
unknown

Not on your lists

14531..14953
DNA (423bp) protein (141aa)

This feature has no annotations

rifcsplowo2_01_scaffold_7173_15
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

15299..16753
DNA (1455bp) protein (485aa)
Oxidative cyclase id=5800341 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Oxidative cyclase Tax=AR15
oxidative cyclase
rifcsplowo2_01_scaffold_7173_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

16910..17107
DNA (198bp) protein (66aa)
id=4744551 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_7173_17
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

comp(17101..17967)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEW6_METFS
hypothetical protein Tax=RBG_13_Actinobacteria_55_18_curated
hypothetical protein
rifcsplowo2_01_scaffold_7173_18
unknown

Not on your lists

17997..18437
DNA (441bp) protein (147aa)

This feature has no annotations

rifcsplowo2_01_scaffold_7173_19

Not on your lists

comp(18246..18875)
DNA (630bp) protein (210aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52612.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
hypothetical protein id=56168 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
rifcsplowo2_01_scaffold_7173_20
Arcobacter nitrofigilis, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18923..19690)
DNA (768bp) protein (256aa)
Protease Do n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V6F6_ARCNC
protease Do
Protease Do {ECO:0000313|EMBL:ADG94226.1}; Flags: Precursor;; TaxID=572480 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcoba
Displaying 20 items

View Taxonomy