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rifcsplowo2_01_scaffold_32747

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_32747_1
unknown

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291..494
DNA (204bp) protein (68aa)

This feature has no annotations

rifcsplowo2_01_scaffold_32747_2

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659..1165
DNA (507bp) protein (169aa)
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 id=5051519 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rps13p; 30S ribosomal protein S13
rifcsplowo2_01_scaffold_32747_3
AR9, Woesearchaeaota, DPANN, Archaea

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1173..1793
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HJ21_PYRSN
rps4p; 30S ribosomal protein S4P; K02986 small subunit ribosomal protein S4 Tax=AR9
30S ribosomal protein S4
rifcsplowo2_01_scaffold_32747_4

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1843..2316
DNA (474bp) protein (158aa)
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
30S ribosomal protein S11 id=5799891 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps11p; 30S ribosomal protein S11P
rifcsplowo2_01_scaffold_32747_5
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

2320..3096
DNA (777bp) protein (259aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=AR9
DNA-directed RNA polymerase subunit D id=5799890 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit D
rifcsplowo2_01_scaffold_32747_6
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


3104..3463
DNA (360bp) protein (120aa)
50S ribosomal protein L18e n=2 Tax=Staphylothermus RepID=A3DMQ7_STAMF id=5103681 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L18; K02883 large subunit ribosomal protein L18e Tax=AR9
50S ribosomal protein L18e
rifcsplowo2_01_scaffold_32747_7
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


3460..3906
DNA (447bp) protein (149aa)
50S ribosomal protein L13 n=1 Tax=Thermococcus sp. AM4 RepID=B7R323_9EURY
rpl13p; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=AR9
50S ribosomal protein L13
rifcsplowo2_01_scaffold_32747_8
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


3909..4313
DNA (405bp) protein (135aa)
rps9p; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=AR9
50S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=5048340 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S9
rifcsplowo2_01_scaffold_32747_9
CG_Woesearch_03, Woesearchaeota, Archaea

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4386..4583
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6); K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] Tax=CG_Woesearch_03
DNA-directed RNA polymerase subunit N n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ id=5103677 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit N
rifcsplowo2_01_scaffold_32747_10
unknown

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4595..4933
DNA (339bp) protein (113aa)

This feature has no annotations

rifcsplowo2_01_scaffold_32747_11
unknown

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comp(4960..5955)
DNA (996bp) protein (332aa)

This feature has no annotations

rifcsplowo2_01_scaffold_32747_12
unknown

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6019..6525
DNA (507bp) protein (169aa)

This feature has no annotations

rifcsplowo2_01_scaffold_32747_13
unknown

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6595..7086
DNA (492bp) protein (164aa)

This feature has no annotations

rifcsplowo2_01_scaffold_32747_14

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7144..9633
DNA (2490bp) protein (830aa)
DNA mismatch repair protein MutS n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AKN2_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
DNA mismatch repair protein MutS
rifcsplowo2_01_scaffold_32747_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(9642..10160)
DNA (519bp) protein (173aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_32747_16
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

10250..10933
DNA (684bp) protein (228aa)
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] Tax=RBG_13_Pacearchaeota_33_26_curate
undecaprenyl diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] id=5048456 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tritrans,polycis-undecaprenyl-diphosphate synthase, geranylgeranyl-diphosphate specific
rifcsplowo2_01_scaffold_32747_17
unknown

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comp(10934..11359)
DNA (426bp) protein (142aa)

This feature has no annotations

rifcsplowo2_01_scaffold_32747_18

Not on your lists

11526..12629
DNA (1104bp) protein (368aa)
DNA mismatch repair protein MutL id=5800681 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
mutL; DNA mismatch repair protein MutL
rifcsplowo2_01_scaffold_32747_19
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12680..13240
DNA (561bp) protein (187aa)
DNA mismatch repair protein MutL n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E8M3_METMS
DNA mismatch repair protein MutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="M
rifcsplowo2_01_scaffold_32747_20
unknown

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13257..13553
DNA (297bp) protein (99aa)

This feature has no annotations

rifcsplowo2_01_scaffold_32747_21
unknown

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13619..14089
DNA (471bp) protein (157aa)

This feature has no annotations

rifcsplowo2_01_scaffold_32747_22
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14118..15149
DNA (1032bp) protein (344aa)
Sodium/calcium exchanger protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPA6_METAC
Sodium/calcium exchanger protein {ECO:0000313|EMBL:AKB84964.1}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Metha
sodium/calcium exchanger protein
rifcsplowo2_01_scaffold_32747_23
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

15198..16976
DNA (1779bp) protein (593aa)
DEAD/DEAH box helicase Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
Putative DNA helicase id=5800576 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
superfamily II RNA helicase
Displaying 23 items

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