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rifcsplowo2_01_scaffold_16375

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_16375_1
unknown

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1..69
DNA (69bp) protein (23aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16375_2
AR4, Woesearchaeaota, DPANN, Archaea

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752..1426
DNA (675bp) protein (225aa)
radC; DNA repair protein RadC; K03630 DNA repair protein RadC id=5044593 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=AR4
radC; DNA repair protein RadC
rifcsplowo2_01_scaffold_16375_3
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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1551..2165
DNA (615bp) protein (205aa)
tRNA-splicing endonuclease subunit alpha; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=RBG_13_Woesearchaeota_36_6_curated
tRNA-intron endonuclease n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EE73_9EURY id=5103054 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
tRNA-intron endonuclease
rifcsplowo2_01_scaffold_16375_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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2233..3321
DNA (1089bp) protein (363aa)
id=5046345 Tax=RBG_13_Woesearchaeota_36_6_curated
seg id=5041810 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_16375_5
unknown

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3327..4064
DNA (738bp) protein (246aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16375_6
AR9, Woesearchaeaota, DPANN, Archaea

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4048..5085
DNA (1038bp) protein (346aa)
flap endonuclease-1; K04799 flap endonuclease-1 [EC:3.-.-.-] Tax=AR9
rad2; flap endonuclease-1; K04799 flap endonuclease-1 [EC:3.-.-.-] id=5046346 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
flap endonuclease-1
rifcsplowo2_01_scaffold_16375_7
CG_Woesearch_02, Woesearchaeota, Archaea

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5149..5361
DNA (213bp) protein (71aa)
Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_16375_8

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5367..5696
DNA (330bp) protein (110aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51199.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
id=4744551 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
rifcsplowo2_01_scaffold_16375_9
AR18, Woesearchaeaota, DPANN, Archaea

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5724..5975
DNA (252bp) protein (84aa)
id=5045290 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_16375_10
AR17, Woesearchaeaota, DPANN, Archaea

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6058..6324
DNA (267bp) protein (89aa)
hypothetical protein Tax=AR17
hypothetical protein id=5044251 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_16375_11
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

6389..7408
DNA (1020bp) protein (340aa)
hypothetical protein; K15429 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=AR9
tRNA (guanine37-N1)-methyltransferase (EC:2.1.1.228)
Met-10+ protein id=5800111 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_16375_12
AR15, Woesearchaeaota, DPANN, Archaea

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comp(7377..8600)
DNA (1224bp) protein (408aa)
Glycosyltransferase id=5800149 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Glycosyltransferase Tax=AR15
glycoside hydrolase
rifcsplowo2_01_scaffold_16375_13

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comp(8814..10040)
DNA (1227bp) protein (409aa)
Proteasome regulatory subunit {ECO:0000313|EMBL:KHO50083.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
NEQ186 id=5800112 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
proteasome-activating nucleotidase
rifcsplowo2_01_scaffold_16375_14
AR9, Woesearchaeaota, DPANN, Archaea

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comp(10483..12522)
DNA (2040bp) protein (680aa)
putative lipoprotein Tax=AR9
transglutaminase domain protein id=5049172 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transglutaminase protein
rifcsplowo2_01_scaffold_16375_15
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

12555..13169
DNA (615bp) protein (205aa)
hypothetical protein; K03151 thiamine biosynthesis protein ThiI Tax=AR9
thiamine biosynthesis protein ThiI
thiamine biosynthesis/tRNA modification protein ThiI; K03151 thiamine biosynthesis protein ThiI id=5241324 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_16375_16
unknown

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13136..13561
DNA (426bp) protein (142aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16375_17
unknown

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13630..14346
DNA (717bp) protein (239aa)
ABC transport system protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUY6_9BACT id=5103795 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ABC transport system protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUY6_9BACT Tax=AR20
ABC transport system protein
rifcsplowo2_01_scaffold_16375_18

Not on your lists

14336..15259
DNA (924bp) protein (308aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52815.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
hypothetical protein
id=5103794 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_16375_19
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

15229..15990
DNA (762bp) protein (254aa)
Uncharacterized protein n=3 Tax=Methanococcus maripaludis RepID=A4FZ02_METM5 id=5103793 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein Tax=AR17
hypothetical protein
Displaying 19 items

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