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rifcsplowo2_01_scaffold_53311

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_53311_1
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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183..398
DNA (216bp) protein (72aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
rifcsplowo2_01_scaffold_53311_2
AR9, Woesearchaeaota, DPANN, Archaea

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484..870
DNA (387bp) protein (129aa)
Tax=AR9
rifcsplowo2_01_scaffold_53311_3
AR9, Woesearchaeaota, DPANN, Archaea

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976..2214
DNA (1239bp) protein (413aa)
ef1a, tuf; elongation factor 1-alpha (EC:3.6.5.3); K03231 elongation factor 1-alpha Tax=AR9
elongation factor 1-alpha (EC:2.7.7.4); K03231 elongation factor 1-alpha id=5043694 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Elongation factor 1-alpha
rifcsplowo2_01_scaffold_53311_4

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2276..2620
DNA (345bp) protein (115aa)
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
30S ribosomal protein S10 id=5800771 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps10p; 30S ribosomal protein S10
rifcsplowo2_01_scaffold_53311_5
unknown

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2686..3459
DNA (774bp) protein (258aa)

This feature has no annotations

rifcsplowo2_01_scaffold_53311_6
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(3510..3986)
DNA (477bp) protein (159aa)
transcription antitermination protein NusG Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5043662 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
LSU ribosomal protein L24A Rpl24A
rifcsplowo2_01_scaffold_53311_7
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(3989..4177)
DNA (189bp) protein (63aa)
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins id=5043663 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
secE; preprotein translocase subunit SecE
rifcsplowo2_01_scaffold_53311_8
unknown

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comp(4444..5235)
DNA (792bp) protein (264aa)

This feature has no annotations

rifcsplowo2_01_scaffold_53311_9

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comp(5410..6429)
DNA (1020bp) protein (340aa)
Cell division protein FtsZ id=5800713 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Cell division protein FtsZ
rifcsplowo2_01_scaffold_53311_10

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comp(6502..7197)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A6AAC
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Peptidyl-prolyl cis-trans isomerase
rifcsplowo2_01_scaffold_53311_11
unknown

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comp(7701..8513)
DNA (813bp) protein (271aa)

This feature has no annotations

rifcsplowo2_01_scaffold_53311_12
RBG_13_OD1_Falkowbacteria_39_9_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(8510..9097)
DNA (588bp) protein (196aa)
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] Tax=RBG_13_OD1_Falkowbacteria_39_9_curated
cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EZB6_9BACT
rifcsplowo2_01_scaffold_53311_13
unknown

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9201..9881
DNA (681bp) protein (227aa)

This feature has no annotations

rifcsplowo2_01_scaffold_53311_14
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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comp(9903..10166)
DNA (264bp) protein (88aa)
Glycosyl transferase family 2 n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HRL7_CYAP4
glycosyl transferase Tax=GWA2_WOR_2_47_8_curated
family 2 glycosyl transferase
Displaying 14 items

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