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rifcsplowo2_01_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 184 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_24_1
GWA1_OD1_44_24_partial, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(1..1404)
DNA (1404bp) protein (468aa)
Parallel beta-helix repeat protein Tax=GWA1_OD1_44_24_partial
rifcsplowo2_01_scaffold_24_2
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(1477..1752)
DNA (276bp) protein (92aa)
DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
DNA-directed RNA polymerase subunit L; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] id=5241762 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase subunit L; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] Tax=AR10
rifcsplowo2_01_scaffold_24_3
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(1777..2346)
DNA (570bp) protein (190aa)
Exosome complex RNA-binding protein Csl4 n=2 Tax=Pyrococcus furiosus RepID=I6URC6_9EURY
exosome complex RNA-binding protein Csl4; K07573 exosome complex component CSL4 Tax=CG_Micra_05
exosome complex RNA-binding protein Csl4
rifcsplowo2_01_scaffold_24_4
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

2430..3308
DNA (879bp) protein (293aa)
hypothetical protein
Uncharacterized membrane protein id=5241760 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized membrane protein Tax=AR10
rifcsplowo2_01_scaffold_24_5
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(3317..4282)
DNA (966bp) protein (322aa)
hypothetical protein
Mechanosensory protein, putative id=5241759 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Mechanosensory protein, putative Tax=AR10
rifcsplowo2_01_scaffold_24_6

Not on your lists

4354..5583
DNA (1230bp) protein (410aa)
hypothetical protein
hypothetical protein; K08975 putative membrane protein id=5241758 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60749.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsplowo2_01_scaffold_24_7
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(5604..7535)
DNA (1932bp) protein (644aa)
ATP-dependent protease Lon n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HMZ6_PYRSN
ATP-dependent protease Lon
ATP-dependent protease Lon {ECO:0000313|EMBL:AEC52000.1}; TaxID=342949 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. (strain NA2).
rifcsplowo2_01_scaffold_24_8
unknown

Not on your lists

7594..8049
DNA (456bp) protein (152aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24_9
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

8104..9027
DNA (924bp) protein (308aa)
ribonuclease Z (EC:3.1.26.11)
ribonuclease Z; K00784 ribonuclease Z [EC:3.1.26.11] id=5241752 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
ribonuclease Z; K00784 ribonuclease Z [EC:3.1.26.11] Tax=AR10
rifcsplowo2_01_scaffold_24_10
unknown

Not on your lists

9024..9635
DNA (612bp) protein (204aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24_11
BJP_IG2069_Methanobacteriales_33_27, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

9638..10345
DNA (708bp) protein (236aa)
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BNP1_9EURY
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
Tax=BJP_IG2069_Methanobacteriales_33_27
rifcsplowo2_01_scaffold_24_12
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(10367..11053)
DNA (687bp) protein (229aa)
metal-dependent hydrolase
metal-dependent hydrolase id=5241750 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
metal-dependent hydrolase Tax=AR10
rifcsplowo2_01_scaffold_24_13
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

11168..11974
DNA (807bp) protein (269aa)
hypothetical protein
transmembrane_regions id=5241748 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
transmembrane_regions Tax=AR10
rifcsplowo2_01_scaffold_24_14
unknown

Not on your lists

12116..12805
DNA (690bp) protein (230aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24_15
unknown

Not on your lists

comp(12811..12987)
DNA (177bp) protein (59aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24_16
unknown

Not on your lists

comp(12998..13372)
DNA (375bp) protein (125aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24_17
unknown

Not on your lists

comp(13382..13561)
DNA (180bp) protein (60aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24_18
unknown

Not on your lists

comp(13568..13834)
DNA (267bp) protein (89aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24_19
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

14039..15208
DNA (1170bp) protein (390aa)
Hypothetical secreted protein, subtilase family Tax=RBG_16_KB1_OP1_55_9_curated
rifcsplowo2_01_scaffold_24_20
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(15205..15618)
DNA (414bp) protein (138aa)
RNA-binding protein NOB1, UPF0271 protein
protein; K11883 RNA-binding protein NOB1; K07060 UPF0271 protein id=5241747 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
protein; K11883 RNA-binding protein NOB1; K07060 UPF0271 protein Tax=AR10
rifcsplowo2_01_scaffold_24_21
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


15685..17157
DNA (1473bp) protein (491aa)
pheS; phenylalanyl-tRNA synthetase alpha chain (EC:6.1.1.20)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] id=5241745 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=AR10
rifcsplowo2_01_scaffold_24_22
unknown

Not on your lists

17154..17678
DNA (525bp) protein (175aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24_23
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


17678..19339
DNA (1662bp) protein (554aa)
phenylalanyl-tRNA synthetase beta chain (EC:6.1.1.20)
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] id=5241744 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=AR10
rifcsplowo2_01_scaffold_24_24
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(19654..21081)
DNA (1428bp) protein (476aa)
rfcL; replication factor C large subunit
rfcL; replication factor C large subunit; K04800 replication factor C large subunit id=5241743 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rfcL; replication factor C large subunit; K04800 replication factor C large subunit Tax=AR10
rifcsplowo2_01_scaffold_24_25
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

21478..22671
DNA (1194bp) protein (398aa)
Translation-associated GTPase id=5800320 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Translation-associated GTPase Tax=AR15
hypothetical protein
rifcsplowo2_01_scaffold_24_26
RIFOXYA2_FULL_RIF_OD1_01_38_24_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(22683..24116)
DNA (1434bp) protein (478aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GQE1_CLOSY
Na+/proline symporter Tax=RIFOXYA2_FULL_RIF_OD1_01_38_24_curated
Na+/proline symporter
rifcsplowo2_01_scaffold_24_27

Not on your lists

24293..25051
DNA (759bp) protein (253aa)
Transcriptional regulator, TrmB id=2823093 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
Transcriptional regulator, TrmB {ECO:0000313|EMBL:KKW24894.1}; TaxID=1620413 species="Bacteria.;" source="bacterium GW2011_GWC1_52_13.;"
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_24_28
unknown

Not on your lists

comp(25192..25875)
DNA (684bp) protein (228aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24_29
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

25954..26358
DNA (405bp) protein (135aa)
Glycosyltransferase 28 domain protein n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DR30_METV3
Glycosyltransferase {ECO:0000313|EMBL:KKH97969.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1
Glycosyltransferase 28 domain-containing protein
rifcsplowo2_01_scaffold_24_30
Bacteriovorax sp. DB6_IX, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26369..28006)
DNA (1638bp) protein (546aa)
Uncharacterized protein {ECO:0000313|EMBL:EQC49816.1}; Flags: Fragment;; TaxID=1353530 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" s
UPI0002C3E2A9 related cluster id=5241738 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
Displaying items 1-30 of 184 in total

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