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rifcsplowo2_01_scaffold_3871

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_3871_1
unknown

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comp(1..1659)
DNA (1659bp) protein (553aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3871_2

Not on your lists


1798..4170
DNA (2373bp) protein (791aa)
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=5044349 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Valyl-tRNA synthetase {ECO:0000313|EMBL:KHO48284.1}; EC=6.1.1.9 {ECO:0000313|EMBL:KHO48284.1};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
valyl tRNA-synthetase (EC:6.1.1.9)
rifcsplowo2_01_scaffold_3871_3
unknown

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4309..4863
DNA (555bp) protein (185aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3871_4
AR10, Diapherotrites, DPANN, Archaea

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4860..6695
DNA (1836bp) protein (612aa)
hypothetical protein
transmembrane_regions id=5240744 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
transmembrane_regions Tax=AR10
rifcsplowo2_01_scaffold_3871_5
unknown

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comp(6792..7337)
DNA (546bp) protein (182aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3871_6
unknown

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comp(7403..8836)
DNA (1434bp) protein (478aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3871_7
unknown

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comp(8833..11841)
DNA (3009bp) protein (1003aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3871_8
unknown

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comp(11832..12455)
DNA (624bp) protein (208aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3871_9
unknown

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12591..13385
DNA (795bp) protein (265aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3871_10
unknown

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13430..14200
DNA (771bp) protein (257aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3871_11
unknown

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comp(14424..17153)
DNA (2730bp) protein (910aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3871_12
unknown

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17297..17623
DNA (327bp) protein (109aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3871_13
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

17854..18504
DNA (651bp) protein (217aa)
ribonuclease HII (EC:3.1.26.4)
ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4] id=5240895 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4] Tax=AR10
rifcsplowo2_01_scaffold_3871_14
uncultured Acidilobus sp. OSP8, Acidilobus, Acidilobales, Thermoprotei, Crenarchaeota, Archaea

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18562..19053
DNA (492bp) protein (164aa)
Molecular chaperone (Small heat shock protein) n=1 Tax=uncultured Acidilobus sp. OSP8 RepID=V4KFP1_9CREN
Molecular chaperone (Small heat shock protein) {ECO:0000313|EMBL:ESQ26108.1}; TaxID=1410575 species="Archaea; Crenarchaeota; Thermoprotei; Acidilobales; Acidilobaceae; Acidilobus; environmental sample
heat shock protein Hsp20
rifcsplowo2_01_scaffold_3871_15
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(19057..19740)
DNA (684bp) protein (228aa)
segregation and condensation protein B
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B id=5240893 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B Tax=AR10
rifcsplowo2_01_scaffold_3871_16
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

19781..20779
DNA (999bp) protein (333aa)
[pyruvate formate-lyase]-activating enzyme; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
[pyruvate formate-lyase]-activating enzyme n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QPP7_PERMH
[pyruvate formate-lyase]-activating enzyme
rifcsplowo2_01_scaffold_3871_17
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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20746..21576
DNA (831bp) protein (277aa)
MEMO1 family protein N47_J06670 n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YGJ2_9DELT
MEMO1 family protein N47_J06670 {ECO:0000256|HAMAP-Rule:MF_00055}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environ
AMMECR1 domain-containing protein
rifcsplowo2_01_scaffold_3871_18
R_OD1_Uhrbacteria_49_11, Uhrbacteria, Parcubacteria, Bacteria

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21573..22130
DNA (558bp) protein (186aa)
AMMECR1 domain protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z334_DESAT
AMMECR1 domain-containing protein; K06990 Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_49_11_curated
AMMECR1 domain protein
rifcsplowo2_01_scaffold_3871_19
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


comp(22131..22691)
DNA (561bp) protein (187aa)
putative deoxyribonucleotide triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] id=5240636 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
putative deoxyribonucleotide triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=AR10
hypothetical protein
rifcsplowo2_01_scaffold_3871_20
CG_CPR02_01, CG_CPR02, Bacteria

Not on your lists

comp(22839..23288)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D185_MYXXD
hypothetical protein Tax=CG_CPR02_01
hypothetical protein
Displaying 20 items

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