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rifcsphigho2_02_scaffold_4238

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_4238_1
CG_Pacearch_06, Pacearchaeota, Archaea

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376..1506
DNA (1131bp) protein (377aa)
Tax=CG_Pacearch_06
rifcsphigho2_02_scaffold_4238_2
CG_Pacearch_06, Pacearchaeota, Archaea

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1696..2073
DNA (378bp) protein (126aa)
Uncharacterized protein MK0525 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Y525_METKA
signal transduction protein with CBS domains Tax=CG_Pacearch_06
signal transduction protein
rifcsphigho2_02_scaffold_4238_3
CG_Pacearch_06, Pacearchaeota, Archaea

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2075..2674
DNA (600bp) protein (200aa)
Tax=CG_Pacearch_06
rifcsphigho2_02_scaffold_4238_4
unknown

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comp(2697..3521)
DNA (825bp) protein (275aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4238_5

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comp(3593..3907)
DNA (315bp) protein (105aa)
Marine sediment metagenome DNA, contig: S01H1_S38339 {ECO:0000313|EMBL:GAG48814.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
DNA-directed RNA polymerase subunit id=5799719 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
transcription termination factor Tfs
rifcsphigho2_02_scaffold_4238_6
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(3958..4842)
DNA (885bp) protein (295aa)
peptidase S26B, signal peptidase; K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] Tax=CG_Woesearch_02
Peptidase S26B, eukaryotic signal peptidase id=5043727 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_4238_7

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comp(5184..5762)
DNA (579bp) protein (193aa)
ZPR1-like zinc finger protein; K06874 zinc finger protein id=5049199 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Zinc finger protein {ECO:0000313|EMBL:KHO45190.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ZPR1-like protein zinc finger protein
rifcsphigho2_02_scaffold_4238_8
RIFOXYA2_FULL_RIF_OD1_01_38_24_curated, RIF-OD1-1, Parcubacteria, Bacteria

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comp(5999..6310)
DNA (312bp) protein (104aa)
hypothetical protein Tax=RIFOXYA2_FULL_RIF_OD1_01_38_24_curated
hypothetical protein; K15383 MtN3 and saliva related transmembrane protein id=5095781 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
hypothetical protein
rifcsphigho2_02_scaffold_4238_9
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6397..6585)
DNA (189bp) protein (63aa)
Stress-responsive transcriptional regulator n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F85_METBF
stress-responsive transcriptional regulator
Putative stress-responsive transcriptional regulator {ECO:0000313|EMBL:AKB83579.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcin
rifcsphigho2_02_scaffold_4238_10

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comp(6954..7361)
DNA (408bp) protein (136aa)
hypothetical protein; K09152 hypothetical protein id=5049200 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45191.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_4238_11

Not on your lists

7668..9680
DNA (2013bp) protein (671aa)
ATP-dependent protease Lon; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] id=5047490 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Lon-like protein ATP-dependent protease {ECO:0000313|EMBL:KHO45699.1}; EC=3.4.21.- {ECO:0000313|EMBL:KHO45699.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ATP-dependent protease Lon
rifcsphigho2_02_scaffold_4238_12
CG_Pacearch_04, Pacearchaeota, Archaea

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9865..13434
DNA (3570bp) protein (1190aa)
glycoside hydrolase 9 Tax=CG_Pacearch_04
hypothetical protein
rifcsphigho2_02_scaffold_4238_13
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(13538..14608)
DNA (1071bp) protein (357aa)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog id=5800645 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog Tax=AR15
putative DNA-binding/iron metalloprotein/AP endonuclease
rifcsphigho2_02_scaffold_4238_14
AR11, Woesearchaeaota, DPANN, Archaea

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15088..15663
DNA (576bp) protein (192aa)
Tax=AR11
rifcsphigho2_02_scaffold_4238_15

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comp(15936..16718)
DNA (783bp) protein (261aa)
Diphthine synthase {ECO:0000256|HAMAP-Rule:MF_01084}; EC=2.1.1.98 {ECO:0000256|HAMAP-Rule:MF_01084};; Diphthamide biosynthesis methyltransferase {ECO:0000256|HAMAP-Rule:MF_01084}; TaxID=1579373 specie
diphthine synthase (EC:2.1.1.98)
Uncharacterized protein id=5799750 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_4238_16
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(17080..18156)
DNA (1077bp) protein (359aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=CG_Woesearch_03
Cell division protein FtsZ id=5799752 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Cell division protein FtsZ
rifcsphigho2_02_scaffold_4238_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18904..19218)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQY8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93402.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
rifcsphigho2_02_scaffold_4238_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(19492..20172)
DNA (681bp) protein (227aa)
nitroreductase Tax=CG_Woesearch_02
nitroreductase id=5044666 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
nitroreductase
Displaying 18 items

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