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rifcsphigho2_02_scaffold_4476

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_4476_1
unknown

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comp(3..1571)
DNA (1569bp) protein (523aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4476_2
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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comp(1622..4339)
DNA (2718bp) protein (906aa)
Non-specific serine/threonine protein kinase n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5Y149_9FIRM
Non-specific serine/threonine protein kinase {ECO:0000313|EMBL:CDA14931.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
protein kinase
rifcsphigho2_02_scaffold_4476_3
S_OP1_64_32, KB1, Bacteria

Not on your lists

comp(4734..5666)
DNA (933bp) protein (311aa)
Carboxylating nicotinate-nucleotide pyrophosphorylase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AHK4_IGNAJ
Nicotinate-nucleotide pyrophosphorylase Tax=S_OP1_64_32
nadC; carboxylating nicotinate-nucleotide pyrophosphorylase
rifcsphigho2_02_scaffold_4476_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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5860..6732
DNA (873bp) protein (291aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_4476_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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6714..7028
DNA (315bp) protein (105aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_4476_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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7306..8454
DNA (1149bp) protein (383aa)
nura domain protein Tax=RBG_13_Bathyarchaeota_38_9_curated
Putative uncharacterized protein id=5800161 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
nura domain-containing protein
rifcsphigho2_02_scaffold_4476_7
CG_Elusi_04, Elusimicrobia, Bacteria

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8591..8854
DNA (264bp) protein (88aa)
Tax=CG_Elusi_04
rifcsphigho2_02_scaffold_4476_8
unknown

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8919..9281
DNA (363bp) protein (121aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4476_9
CG_Woesearch_02, Woesearchaeota, Archaea

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9868..12564
DNA (2697bp) protein (899aa)
PpsA; phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=CG_Woesearch_02
ppsA; phosphoenolpyruvate synthase PpsA (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RSE0_METFO
rifcsphigho2_02_scaffold_4476_10

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comp(12594..13676)
DNA (1083bp) protein (361aa)
Putative RNA methylase id=5800383 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61714.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsphigho2_02_scaffold_4476_11

Not on your lists

13777..14139
DNA (363bp) protein (121aa)
Uncharacterized protein id=5800381 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61712.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_02_scaffold_4476_12
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14392..15213)
DNA (822bp) protein (274aa)
RNA methyltransferase TrmH family (EC:2.1.1.-)
rRNA methyltransferase n=1 Tax=Methanocaldococcus villosus RepID=UPI0003769CDF
RNA methyltransferase, trmh family, group 1 Tax=AR17
rifcsphigho2_02_scaffold_4476_13
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

15340..15591
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036DBC9D
Putative uncharacterized protein Tax=AR19
hypothetical protein
rifcsphigho2_02_scaffold_4476_14

Not on your lists

15610..16011
DNA (402bp) protein (134aa)
PilT protein domain-containing protein {ECO:0000313|EMBL:KKS95207.1}; TaxID=1618443 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_43_14.;"
PilT protein domain-containing protein id=5085538 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
PilT protein domain-containing protein
rifcsphigho2_02_scaffold_4476_15
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(16035..17231)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003648333
peptidase M50 family Tax=CG_Woesearch_02
Peptidase M50
rifcsphigho2_02_scaffold_4476_16

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comp(17657..18055)
DNA (399bp) protein (133aa)
Marine sediment metagenome DNA, contig: S01H1_S10434 {ECO:0000313|EMBL:GAG01596.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Translation initiation factor 5A id=5800376 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Translation initiation factor 5A
rifcsphigho2_02_scaffold_4476_17

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18210..18653
DNA (444bp) protein (148aa)
single-stranded DNA-binding replication protein A, large (70 kD) subunit; K07466 replication factor A1 id=5048480 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor A1 {ECO:0000313|EMBL:KHO45514.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
nucleic acid binding OB-fold tRNA/helicase-type
rifcsphigho2_02_scaffold_4476_trna_1
unknown

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18709..18782
DNA (74bp)
transferRNA
rifcsphigho2_02_scaffold_4476_18
unknown

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19205..19384
DNA (180bp) protein (60aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4476_19
AR18, Woesearchaeaota, DPANN, Archaea

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19464..19763
DNA (300bp) protein (100aa)
Tax=AR18
rifcsphigho2_02_scaffold_4476_20

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19824..20453
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362D490
Uncharacterized protein {ECO:0000313|EMBL:KHO48566.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
boa3; bacterio-opsin activator-like protein
rifcsphigho2_02_scaffold_4476_21
unknown

Not on your lists

20792..21124
DNA (333bp) protein (111aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4476_22
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

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21162..22685
DNA (1524bp) protein (508aa)
Selenocysteine lyase n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X1J1_9NOST
selenocysteine lyase
Selenocysteine lyase {ECO:0000313|EMBL:AFZ25906.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
rifcsphigho2_02_scaffold_4476_23
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

22893..24353
DNA (1461bp) protein (487aa)
Malic enzyme n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IJ98_THETR
malic enzyme
Malic enzyme {ECO:0000313|EMBL:AGB18072.1}; TaxID=698948 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;"
rifcsphigho2_02_scaffold_4476_24
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(24389..26575)
DNA (2187bp) protein (729aa)
Putative uncharacterized protein Tax=AR11
hypothetical protein id=5048098 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_4476_25

Not on your lists

comp(26865..29153)
DNA (2289bp) protein (763aa)
hypothetical protein id=5048512 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45546.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
Displaying 26 items

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