ggKbase home page

rifcsphigho2_02_scaffold_3695

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_3695_1
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(358..900)
DNA (543bp) protein (181aa)
seg Tax=CG_Woesearch_02
seg 2..18 id=1241391 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
rifcsphigho2_02_scaffold_3695_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

1302..1874
DNA (573bp) protein (191aa)
DNA-binding protein n=3 Tax=Pyrococcus RepID=Q8TZW3_PYRFU id=5103692 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-binding protein; K07572 putative nucleotide binding protein Tax=RBG_13_Woesearchaeota_36_6_curated
DNA-binding protein
rifcsphigho2_02_scaffold_3695_3
unknown

Not on your lists

comp(1905..4544)
DNA (2640bp) protein (880aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3695_4
unknown

Not on your lists

4663..5274
DNA (612bp) protein (204aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3695_5
Toxoplasma gondii, Toxoplasma, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

5228..7885
DNA (2658bp) protein (886aa)
M protein repeat-containing protein (EC:3.4.21.72)
M protein repeat-containing protein n=1 Tax=Toxoplasma gondii ME49 RepID=UPI000185E582
M protein repeat-containing protein {ECO:0000313|EMBL:CEL78483.1}; TaxID=432359 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Toxoplasm
rifcsphigho2_02_scaffold_3695_6

Not on your lists

8032..8589
DNA (558bp) protein (186aa)
XRE family transcriptional regulator {ECO:0000313|EMBL:KHO51376.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
XRE family transcriptional regulator id=5044639 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative transcription regulator, containing CBS protein
rifcsphigho2_02_scaffold_3695_7
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(8625..9242)
DNA (618bp) protein (206aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WDJ0_FUSMR
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
HAD family hydrolase
rifcsphigho2_02_scaffold_3695_8

Not on your lists

comp(9283..9921)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B743C
Uncharacterized protein {ECO:0000313|EMBL:KHO47027.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsphigho2_02_scaffold_3695_9

Not on your lists

comp(9908..10309)
DNA (402bp) protein (134aa)
coiled-coil id=5043712 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47028.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsphigho2_02_scaffold_3695_10
RIFOXYC2_FULL_OD1_Magasanikbacteria_42_28_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10479..11927)
DNA (1449bp) protein (483aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFOXYC2_FULL_OD1_Magasanikbacteria_42_28_curated
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] id=3360 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
phosphoenolpyruvate synthase (EC:2.7.9.2)
rifcsphigho2_02_scaffold_3695_11
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(11924..13483)
DNA (1560bp) protein (520aa)
putative phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] id=3360 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
phosphoenolpyruvate synthase
rifcsphigho2_02_scaffold_3695_12
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13713..14741)
DNA (1029bp) protein (343aa)
pta; phosphate acetyltransferase (EC:2.3.1.- 2.3.1.8)
Phosphate acetyltransferase {ECO:0000313|EMBL:EET88379.1}; EC=2.3.1.8 {ECO:0000313|EMBL:ADO12078.1};; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
Phosphate acetyltransferase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PR15_9CLOT
rifcsphigho2_02_scaffold_3695_13
unknown

Not on your lists

14964..16538
DNA (1575bp) protein (525aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3695_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16707..19418)
DNA (2712bp) protein (904aa)
smc domain protein; K03546 exonuclease SbcC Tax=CG_Woesearch_02
SMC domain protein id=5800469 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
smc domain-containing protein
rifcsphigho2_02_scaffold_3695_15
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

19774..20985
DNA (1212bp) protein (404aa)
23S rRNA (uracil-5-)-methyltransferase id=5041726 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
23S rRNA (uracil-5-)-methyltransferase Tax=AR4
TrmA; SAM-dependent methyltransferase
rifcsphigho2_02_scaffold_3695_16

Not on your lists

comp(21120..21518)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003771515
Protein containing Nucleotide binding protein, PINc domain {ECO:0000313|EMBL:EFK96340.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metageno
Protein containing Nucleotide binding protein, PINc protein
rifcsphigho2_02_scaffold_3695_17
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(21521..21751)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000364A0BE
hypothetical protein
Tax=BJP_IG2158_Thermoplasmatales_53_16
rifcsphigho2_02_scaffold_3695_18
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(22017..22895)
DNA (879bp) protein (293aa)
glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2] Tax=CG_Woesearch_01
Glucokinase, ROK family n=3 Tax=Thermoanaerobacter RepID=F1ZZS8_THEET
ROK family glucokinase
rifcsphigho2_02_scaffold_3695_19

Not on your lists

comp(22953..23975)
DNA (1023bp) protein (341aa)
Bifunctional phosphoglucose/phosphomannose isomerase (Pgi-pmi) {ECO:0000313|EMBL:AIF00813.1}; EC=5.3.1.8 {ECO:0000313|EMBL:AIF00813.1};; TaxID=1457870 species="Archaea; Euryarchaeota; environmental sa
Bifunctional phosphoglucose/phosphomannose isomerase id=5800523 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
bifunctional phosphoglucose/phosphomannose isomerase
rifcsphigho2_02_scaffold_3695_20
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24276..25310)
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZR2_ANATU
chaperone protein; K05516 curved DNA-binding protein Tax=RBG_13_Deltaproteobacteria_52_11_curated
integrase
rifcsphigho2_02_scaffold_3695_21
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(25322..26167)
DNA (846bp) protein (282aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
Uncharacterized protein id=5799738 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_3695_22
unknown

Not on your lists

26376..26705
DNA (330bp) protein (110aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3695_23
unknown

Not on your lists

27060..28130
DNA (1071bp) protein (357aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3695_24
Planococcus donghaensis, Planococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28439..31036
DNA (2598bp) protein (866aa)
Putative 3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Bhargavaea cecembensis DSE10 RepID=M7NEE7_9BACL
3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:EGA90489.1}; TaxID=933115 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planococcus
rifcsphigho2_02_scaffold_3695_25
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

31038..32345
DNA (1308bp) protein (436aa)
Acetyl-CoA C-acetyltransferase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SH83_9BACT
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:BAL55519.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
fadA; 3-ketoacyl-CoA thiolase
rifcsphigho2_02_scaffold_3695_26
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(32410..33915)
DNA (1506bp) protein (502aa)
hypothetical protein, partial n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003804E87
mechanosensitive ion channel MscS Tax=CG_Pacearch_01
mechanosensitive ion channel MscS
rifcsphigho2_02_scaffold_3695_27
Leptolyngbya sp. PCC 7376, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(34134..34541)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 7376 RepID=K9Q3W9_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY39784.1}; TaxID=111781 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7376.;"
rifcsphigho2_02_scaffold_3695_28
unknown

Not on your lists

34927..35121
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying 28 items

View Taxonomy