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rifcsphigho2_02_scaffold_3959

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_3959_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(101..592)
DNA (492bp) protein (164aa)
Protein of DIM6/NTAB family n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U8V5_9EURY
actinorhodin polyketide dimerase-related protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
rifcsphigho2_02_scaffold_3959_2

Not on your lists

comp(685..1275)
DNA (591bp) protein (197aa)
Demethylmenaquinone methyltransferase id=5799543 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:AJF60874.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
type 11 methyltransferase
rifcsphigho2_02_scaffold_3959_3
unknown

Not on your lists

1584..2216
DNA (633bp) protein (211aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3959_4

Not on your lists


2498..3235
DNA (738bp) protein (246aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5043660 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L11 {ECO:0000313|EMBL:KHO46636.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L11
rifcsphigho2_02_scaffold_3959_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(3920..4747)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003721B80
hypothetical protein; K09716 hypothetical protein Tax=CG_Woesearch_02
D-tyrosyl-tRNA(Tyr) deacylase
rifcsphigho2_02_scaffold_3959_6
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5038..5664
DNA (627bp) protein (209aa)
NUDIX hydrolase n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L9M8_MAGSM
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABK44671.1}; TaxID=156889 species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="Magnetococcus marinus (s
rifcsphigho2_02_scaffold_3959_7
unknown

Not on your lists

comp(5743..6030)
DNA (288bp) protein (96aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3959_8
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

6718..7668
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=2 Tax=uncultured archaeon RepID=D1J9M4_9ARCH id=5103866 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
phoU1; transcription regulator (homolog to phosphate uptake regulator) Tax=CG_Woesearch_03
hypothetical protein
rifcsphigho2_02_scaffold_3959_9
unknown

Not on your lists

comp(7783..9051)
DNA (1269bp) protein (423aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3959_10
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

9346..10089
DNA (744bp) protein (248aa)
gcd1; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] id=5241118 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=AR10
rifcsphigho2_02_scaffold_3959_11

Not on your lists

10199..12349
DNA (2151bp) protein (717aa)
Amylo-alpha-1,6-glucosidase id=5043633 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46609.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_3959_12
unknown

Not on your lists

12405..13316
DNA (912bp) protein (304aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3959_13
unknown

Not on your lists

comp(13780..14376)
DNA (597bp) protein (199aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3959_14
unknown

Not on your lists

comp(14552..14734)
DNA (183bp) protein (61aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3959_15
R_OD1_Kaiserbacteria_55_20, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14731..15315)
DNA (585bp) protein (195aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_55_20_curated
rifcsphigho2_02_scaffold_3959_16
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

15495..16160
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JIX2_9ARCH
transposase Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
hypothetical protein
rifcsphigho2_02_scaffold_3959_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16213..16827)
DNA (615bp) protein (205aa)
hypothetical protein Tax=CG_Woesearch_02
tRNA methylase id=5046019 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_3959_18

Not on your lists

comp(16911..17696)
DNA (786bp) protein (262aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50909.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
DNA polymerase beta domain protein region (Fragment) id=5800819 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA polymerase beta protein
rifcsphigho2_02_scaffold_3959_19
unknown

Not on your lists

comp(17887..18708)
DNA (822bp) protein (274aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3959_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

18922..20565
DNA (1644bp) protein (548aa)
GroL; HSP60 family chaperonin Tax=CG_Woesearch_02
thermosome id=5043657 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Thermosome, chaperonin Cpn60/TCP-1
rifcsphigho2_02_scaffold_3959_21
GWA2_OD1_38_13, Parcubacteria, Bacteria

Not on your lists

20811..21440
DNA (630bp) protein (210aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ54618.1}; TaxID=1618811 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_13.;"
hypothetical protein id=5049618 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
putative membrane-associated protein
rifcsphigho2_02_scaffold_3959_22
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(21749..22411)
DNA (663bp) protein (221aa)
hypothetical protein Faci_06996 Tax=GWA2_OD1_40_9
hypothetical protein id=5048447 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_3959_23
Enterococcus pallens, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22650..23876
DNA (1227bp) protein (409aa)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Enterococcus pallens ATCC BAA-351 RepID=R2SBP8_9ENTE rbh
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1158607 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enter
N-acetylglutamate synthase (N-acetylornithine aminotransferase)
rifcsphigho2_02_scaffold_3959_24
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

23971..24828
DNA (858bp) protein (286aa)
acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RBG_13_WOR_2_41_10_curated
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R962_CLOSW
rifcsphigho2_02_scaffold_3959_25
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

25078..26367
DNA (1290bp) protein (430aa)
acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11); K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] Tax=RBG_16_RIF03_38_10_curated
acetylornithine aminotransferase (EC:2.6.1.11)
acetylornithine aminotransferase n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI00037F10AD
rifcsphigho2_02_scaffold_3959_26
GWA2_OD1_44_12, Parcubacteria, Bacteria

Not on your lists

26410..27429
DNA (1020bp) protein (340aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWN8_METFV
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000313|EMBL:KKT34620.1}; TaxID=1618829 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_44_12.;"
rifcsphigho2_02_scaffold_3959_27
GWB2_Elusimicrobia_63_22_curated, Elusimicrobia, Bacteria

Not on your lists

27462..28706
DNA (1245bp) protein (415aa)
argG; argininosuccinate synthase ArgG (EC:6.3.4.5) Tax=GWB2_Elusimicrobia_63_22_curated
argG; argininosuccinate synthase ArgG (EC:6.3.4.5)
ArgG: argininosuccinate synthase id=2148330 bin=GWB2_Elusimicrobium_63_22 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good - rbh
rifcsphigho2_02_scaffold_3959_28
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29101..30213
DNA (1113bp) protein (371aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
carbamoyl-phosphate synthase, small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Odoribacter sp. CAG:788 RepID=R5P0Q1_9PORP
rifcsphigho2_02_scaffold_3959_29
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

30279..33641
DNA (3363bp) protein (1121aa)
carB; Carbamoylphosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RBG_13_Euryarchaeota_31_8_curated
Carbamoyl-phosphate synthase, large subunit id=2136051 bin=GWD2_Bacteroidetes_40_43 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
carB; carbamoylphosphate synthase large subunit
rifcsphigho2_02_scaffold_3959_30
R_OD1_Nomurabacteria_39_18, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

33875..35053
DNA (1179bp) protein (393aa)
Argininosuccinate lyase (EC:4.3.2.1) Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_39_18_curated
Argininosuccinate lyase n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CHW6_KOSOT rbh
argininosuccinate lyase
Displaying items 1-30 of 31 in total

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