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rifcsphigho2_02_scaffold_2749

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2749_1
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

178..894
DNA (717bp) protein (239aa)
UPI0002893CB3 related cluster id=5044041 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
UPI0002893CB3 related cluster Tax=AR4
hypothetical protein
rifcsphigho2_02_scaffold_2749_2

Not on your lists

950..2194
DNA (1245bp) protein (415aa)
Glycosyl transferase group 1 id=5799630 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Glycosyl transferase group 1 {ECO:0000313|EMBL:AJF60961.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsphigho2_02_scaffold_2749_3
R_OP11_Roizmanbacteria_38_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(2264..2644)
DNA (381bp) protein (127aa)
MazG nucleotide pyrophosphohydrolase Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_38_11_curated
MazG nucleotide pyrophosphohydrolase id=133331 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
nucleotide pyrophosphohydrolase
rifcsphigho2_02_scaffold_2749_4
unknown

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comp(2743..3312)
DNA (570bp) protein (190aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2749_5

Not on your lists

3617..3973
DNA (357bp) protein (119aa)
hypothetical protein
id=5103013 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62294.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_2749_6
unknown

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comp(4351..5211)
DNA (861bp) protein (287aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2749_7
unknown

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comp(5424..6032)
DNA (609bp) protein (203aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2749_8

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6153..6905
DNA (753bp) protein (251aa)
ABC transporter, ATPase subunit id=5800240 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ABC transporter, ATPase subunit {ECO:0000313|EMBL:AJF61571.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
ABC transporter-like protein
rifcsphigho2_02_scaffold_2749_9

Not on your lists

7035..8360
DNA (1326bp) protein (442aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO49328.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein id=5047429 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_2749_10

Not on your lists

8827..10056
DNA (1230bp) protein (410aa)
hypothetical protein; K02004 putative ABC transport system permease protein id=5046029 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45839.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsphigho2_02_scaffold_2749_11

Not on your lists

10424..11641
DNA (1218bp) protein (406aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO49496.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
hypothetical protein; K02004 putative ABC transport system permease protein id=5046030 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_2749_12
unknown

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comp(12025..13932)
DNA (1908bp) protein (636aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2749_13

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comp(14206..15573)
DNA (1368bp) protein (456aa)
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:KHO52445.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
Putative uncharacterized protein id=3727711 bin=GWF2_Bacteroidetes_33_38 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
major facilitator transporter
rifcsphigho2_02_scaffold_2749_14
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(15676..17076)
DNA (1401bp) protein (467aa)
asparaginyl-tRNA synthetase; K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] Tax=AR19
Asparaginyl-tRNA synthetase n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGF4_ACIB4 id=5103855 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Asparaginyl-tRNA synthetase
rifcsphigho2_02_scaffold_2749_15
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

17224..17922
DNA (699bp) protein (233aa)
id=5045884 Tax=CG_Pacearch_04
rifcsphigho2_02_scaffold_2749_16

Not on your lists

18052..18327
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52059.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Putative uncharacterized protein id=5045885 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
transcriptional regulator
rifcsphigho2_02_scaffold_2749_17
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(18592..20367)
DNA (1776bp) protein (592aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=CG_Woesearch_01
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] id=5240563 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_2749_18
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(20783..21106)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PRZ6_METMA
hypothetical protein Tax=CG_Woesearch_03
hypothetical protein
rifcsphigho2_02_scaffold_2749_19
unknown

Not on your lists

comp(21132..21689)
DNA (558bp) protein (186aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2749_20
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(21789..23813)
DNA (2025bp) protein (675aa)
hypothetical protein; K10747 DNA ligase 1 [EC:6.5.1.1] Tax=RBG_13_Woesearchaeota_36_6_curated
ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1] id=5051044 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA ligase 1 (EC:6.5.1.1)
rifcsphigho2_02_scaffold_2749_21
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

24111..24914
DNA (804bp) protein (268aa)
Outer membrane protein n=2 Tax=Methanosarcina mazei RepID=M1Q3Z4_METMZ
Membrane protein {ECO:0000313|EMBL:KKH37609.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Meth
hypothetical protein
rifcsphigho2_02_scaffold_2749_22

Not on your lists

25703..26371
DNA (669bp) protein (223aa)
ArsR family transcriptional regulator id=5050187 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ArsR family transcriptional regulator {ECO:0000313|EMBL:KHO44968.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ArsR family transcriptional regulator
rifcsphigho2_02_scaffold_2749_23
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

26442..27131
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362D490
hypothetical protein; K06930 Tax=RBG_13_Pacearchaeota_36_9_curated
bacterio-opsin activator HTH domain-containing protein
rifcsphigho2_02_scaffold_2749_24
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

27380..27814
DNA (435bp) protein (145aa)
Secondary thiamine-phosphate synthase enzyme n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TBY0_9CYAN
secondary thiamine-phosphate synthase enzyme
Secondary thiamine-phosphate synthase enzyme {ECO:0000313|EMBL:AFY79918.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria a
rifcsphigho2_02_scaffold_2749_25

Not on your lists

27903..28256
DNA (354bp) protein (118aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2BYA4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD78807.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
rifcsphigho2_02_scaffold_2749_26

Not on your lists

28367..28942
DNA (576bp) protein (192aa)
hypothetical protein id=5042249 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46747.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_2749_27
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

28939..29796
DNA (858bp) protein (286aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
Uncharacterized protein id=5799854 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
metal dependent hydrolase
rifcsphigho2_02_scaffold_2749_28

Not on your lists

comp(29935..30849)
DNA (915bp) protein (305aa)
HAD phosphatase subfamily IIIA {ECO:0000313|EMBL:KHO51076.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
rifcsphigho2_02_scaffold_2749_29
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(30975..31985)
DNA (1011bp) protein (337aa)
Transcriptional regulator n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T9E5_9EURY
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
rifcsphigho2_02_scaffold_2749_30
unknown

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comp(32277..33194)
DNA (918bp) protein (306aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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