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rifcsphigho2_02_scaffold_7222

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_7222_1
AR15, Woesearchaeaota, DPANN, Archaea

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comp(118..363)
DNA (246bp) protein (82aa)
Uncharacterized protein conserved in archaea id=5799820 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein conserved in archaea Tax=AR15
rifcsphigho2_02_scaffold_7222_2
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(457..786)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000371FCFD
GimC; prefoldin, chaperonin cofactor; K04798 prefoldin beta subunit Tax=AR11
Prefoldin subunit beta
rifcsphigho2_02_scaffold_7222_3
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(840..1091)
DNA (252bp) protein (84aa)
Marine sediment metagenome DNA, contig: S01H1_S17826 Tax=CG_Woesearch_02
rifcsphigho2_02_scaffold_7222_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1163..1300)
DNA (138bp) protein (46aa)
hypothetical protein
RNA polymerase Rbp10 id=5799817 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
rifcsphigho2_02_scaffold_7222_5
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1359..1709)
DNA (351bp) protein (117aa)
rpl37ae; 50S ribosomal protein L37; K02921 large subunit ribosomal protein L37Ae Tax=CG_Woesearch_02
rpl37ae; 50S ribosomal protein L37; K02921 large subunit ribosomal protein L37Ae id=5044064 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L37Ae
rifcsphigho2_02_scaffold_7222_trna_1
unknown

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comp(1794..1900)
DNA (107bp)
transferRNA
rifcsphigho2_02_scaffold_7222_6

Not on your lists

2350..4035
DNA (1686bp) protein (562aa)
Antibiotic transport system permease protein {ECO:0000313|EMBL:KHO51089.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
ABC transporter; K09686 antibiotic transport system permease protein id=5041890 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein; K14565 nucleolar protein 58
rifcsphigho2_02_scaffold_7222_7
CG_Woesearch_02, Woesearchaeota, Archaea

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4139..4357
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0M7E8_9EURY
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
rifcsphigho2_02_scaffold_7222_8
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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4358..4609
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0NH92_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB72915.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="F
RelE/StbE family addiction module toxin
rifcsphigho2_02_scaffold_7222_9
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(4657..5184)
DNA (528bp) protein (176aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36799.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
rifcsphigho2_02_scaffold_7222_10
unknown

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5286..5927
DNA (642bp) protein (214aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7222_11
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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5917..6483
DNA (567bp) protein (189aa)
adenylate kinase (EC:2.7.4.3) Tax=RBG_13_Woesearchaeota_36_6_curated
adenylate kinase (EC:2.7.4.3) id=5045728 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Adenylate kinase
rifcsphigho2_02_scaffold_7222_12
unknown

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6676..7527
DNA (852bp) protein (284aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7222_13
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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8667..10043
DNA (1377bp) protein (459aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=237368 species="Bacteri
Phosphoglucosamine mutase id=4749384 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
glmM; phosphoglucosamine mutase
rifcsphigho2_02_scaffold_7222_14
CG_Woesearch_01, Woesearchaeota, Archaea

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10162..11385
DNA (1224bp) protein (408aa)
glucose-1-phosphate thymidylyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=CG_Woesearch_01
Glucose-1-phosphate thymidylyltransferase id=4749385 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
glucose-1-phosphate thymidylyltransferase
rifcsphigho2_02_scaffold_7222_15
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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11507..12163
DNA (657bp) protein (219aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GCX5_NITSI
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:AEJ03126.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.
rifcsphigho2_02_scaffold_7222_16
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12166..12876)
DNA (711bp) protein (237aa)
Radical SAM family protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12Z23_METBU
radical SAM family Fe-S protein
Radical SAM family protein {ECO:0000313|EMBL:ABE51303.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococco
rifcsphigho2_02_scaffold_7222_17
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(12900..13916)
DNA (1017bp) protein (339aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Type-2 serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01278}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_01278};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01278}; Seryl-tRNA(Ser/Sec) synthetase {E
Type-2 serine--tRNA ligase n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DTG1_METV3
rifcsphigho2_02_scaffold_7222_18

Not on your lists

14015..14746
DNA (732bp) protein (244aa)
Transcriptional regulator, TrmB
transcriptional regulator TrmB id=5046026 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcriptional regulator TrmB {ECO:0000313|EMBL:KHO45836.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsphigho2_02_scaffold_7222_19
unknown

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14835..15134
DNA (300bp) protein (100aa)

This feature has no annotations

Displaying 20 items

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