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rifcsphigho2_02_scaffold_1139

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_1139_1
unknown

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3..68
DNA (66bp) protein (22aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1139_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(322..759)
DNA (438bp) protein (146aa)
50S ribosomal protein L14; K02875 large subunit ribosomal protein L14e Tax=CG_Woesearch_02
50S ribosomal protein L14e id=5800175 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L14e
rifcsphigho2_02_scaffold_1139_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(924..1190)
DNA (267bp) protein (89aa)
50S ribosomal protein L34e n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RH16_METVM
LSU ribosomal protein l34e; K02915 large subunit ribosomal protein L34e Tax=CG_Woesearch_02
rpl34e; 50S ribosomal protein L34e
rifcsphigho2_02_scaffold_1139_4

Not on your lists

comp(1275..2102)
DNA (828bp) protein (276aa)
Uncharacterized protein id=5800172 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61503.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_02_scaffold_1139_5

Not on your lists

comp(2239..3666)
DNA (1428bp) protein (476aa)
Protein translocase subunit SecY {ECO:0000256|RuleBase:RU000537}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
SecY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5041782 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Protein translocase subunit SecY
rifcsphigho2_02_scaffold_1139_6

Not on your lists


comp(3783..4352)
DNA (570bp) protein (190aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl15p; 50S ribosomal protein L15P; K02876 large subunit ribosomal protein L15 id=5042323 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L15P
rifcsphigho2_02_scaffold_1139_7

Not on your lists


comp(4473..4937)
DNA (465bp) protein (155aa)
Large subunit ribosomal protein L30 {ECO:0000313|EMBL:KHO51167.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
50S ribosomal protein L30P id=5800042 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rpl30p; 50S ribosomal protein L30P
rifcsphigho2_02_scaffold_1139_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(4946..5896)
DNA (951bp) protein (317aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 Tax=CG_Woesearch_02
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=5042321 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S5
rifcsphigho2_02_scaffold_1139_9

Not on your lists


comp(5927..6526)
DNA (600bp) protein (200aa)
50S ribosomal protein L18P n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QQR0_VULDI
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L18
rifcsphigho2_02_scaffold_1139_10

Not on your lists

comp(6596..7093)
DNA (498bp) protein (166aa)
50S ribosomal protein L19e id=5800045 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rpl19e; 50S ribosomal protein L19
rifcsphigho2_02_scaffold_1139_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(7112..7726)
DNA (615bp) protein (205aa)
50S ribosomal protein L32; K02912 large subunit ribosomal protein L32e id=5042318 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ribosomal protein L32e; K02912 large subunit ribosomal protein L32e Tax=CG_Woesearch_02
ribosomal protein L32e
rifcsphigho2_02_scaffold_1139_12

Not on your lists


comp(7981..8517)
DNA (537bp) protein (179aa)
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS12046.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl6p; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 id=5042317 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rpl6p; 50S ribosomal protein L6P
rifcsphigho2_02_scaffold_1139_13

Not on your lists


comp(8558..8950)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 {ECO:0000313|EMBL:AJS12047.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8P; K02994 small subunit ribosomal protein S8 id=5042316 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S8
rifcsphigho2_02_scaffold_1139_14

Not on your lists


comp(9504..10022)
DNA (519bp) protein (173aa)
50S ribosomal protein L5P {ECO:0000313|EMBL:AJS12048.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=5041772 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L5
rifcsphigho2_02_scaffold_1139_15
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


comp(10047..10757)
DNA (711bp) protein (237aa)
30S ribosomal protein S4e n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7K5_METSW
SSU ribosomal protein s4e; K02987 small subunit ribosomal protein S4e Tax=RBG_13_Woesearchaeota_36_6_curated
30S ribosomal protein S4
rifcsphigho2_02_scaffold_1139_16

Not on your lists


comp(10926..11336)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372D201
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24P
rifcsphigho2_02_scaffold_1139_17

Not on your lists


comp(11371..11781)
DNA (411bp) protein (137aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5041769 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L14P
rifcsphigho2_02_scaffold_1139_18

Not on your lists


comp(11921..12244)
DNA (324bp) protein (108aa)
30S ribosomal protein S17P n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VYH7_9EURY id=5103261 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17P
rifcsphigho2_02_scaffold_1139_19
unknown

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comp(12321..12605)
DNA (285bp) protein (95aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1139_20
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(12634..12957)
DNA (324bp) protein (108aa)
translation initiation factor 1 (eif-1/sui1); K03113 translation initiation factor 1 Tax=RBG_13_Woesearchaeota_36_6_curated
translation initiation factor 1 (eIF-1/SUI1); K03113 translation initiation factor 1 id=5042308 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
translation initiation factor 1 (eif-1/sui1)
rifcsphigho2_02_scaffold_1139_21
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(13033..13257)
DNA (225bp) protein (75aa)
50S ribosomal protein L29P n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HJY0_PYRSN
rpmC; 50S ribosomal protein L29
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=342949 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. (strain N
rifcsphigho2_02_scaffold_1139_22

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comp(13342..14136)
DNA (795bp) protein (265aa)
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps3p; 30S ribosomal protein S3P; K02982 small subunit ribosomal protein S3 id=5042306 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S3
rifcsphigho2_02_scaffold_1139_23

Not on your lists


comp(14217..14816)
DNA (600bp) protein (200aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22P id=5800059 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L22P
rifcsphigho2_02_scaffold_1139_24

Not on your lists


comp(14872..15255)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036287C9
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S19P
rifcsphigho2_02_scaffold_1139_25

Not on your lists


comp(15309..16022)
DNA (714bp) protein (238aa)
50S ribosomal protein L2P {ECO:0000313|EMBL:AJS12055.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 id=5042303 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L2
rifcsphigho2_02_scaffold_1139_26
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(16140..16403)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003624D48
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=AR17
50S ribosomal protein L23P
rifcsphigho2_02_scaffold_1139_27

Not on your lists


comp(16691..17494)
DNA (804bp) protein (268aa)
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS12056.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl4lp; 50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e id=5042301 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L4
rifcsphigho2_02_scaffold_1139_28

Not on your lists


comp(17560..18567)
DNA (1008bp) protein (336aa)
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5042300 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L3
rifcsphigho2_02_scaffold_1139_29
unknown

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comp(19289..19477)
DNA (189bp) protein (63aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1139_30

Not on your lists

19691..21361
DNA (1671bp) protein (557aa)
id=5046362 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46163.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Displaying items 1-30 of 73 in total

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