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rifcsphigho2_02_scaffold_1831

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_1831_1
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

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557..1930
DNA (1374bp) protein (458aa)
hypothetical protein; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000372F550
putative transcriptional regulator
rifcsphigho2_02_scaffold_1831_2
unknown

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2772..3509
DNA (738bp) protein (246aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1831_3
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

3820..4656
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000371A96B
site-specific recombinase XerD Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
rifcsphigho2_02_scaffold_1831_4

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4733..5779
DNA (1047bp) protein (349aa)
Radical SAM protein {ECO:0000313|EMBL:KHO49664.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Radical SAM domain-containing protein id=5799836 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
radical SAM domain-containing protein
rifcsphigho2_02_scaffold_1831_5
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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5835..6563
DNA (729bp) protein (243aa)
NH(3)-dependent NAD+ synthetase NadE; K01916 NAD+ synthase [EC:6.3.1.5] id=5090879 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Putative NH(3)-dependent NAD(+) synthetase {ECO:0000313|EMBL:KKP37254.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
NH(3)-dependent NAD(+) synthetase
rifcsphigho2_02_scaffold_1831_6
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

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comp(6887..7348)
DNA (462bp) protein (154aa)
NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] Tax=RBG_13_Nitrospirae_39_12_curated
NUDIX hydrolase n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI000347243D
ADP-ribose pyrophosphatase
rifcsphigho2_02_scaffold_1831_7

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7455..9059
DNA (1605bp) protein (535aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B8391
Uncharacterized protein {ECO:0000313|EMBL:KHO51211.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein
rifcsphigho2_02_scaffold_1831_8
unknown

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comp(9110..10228)
DNA (1119bp) protein (373aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1831_9

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comp(10305..11387)
DNA (1083bp) protein (361aa)
Type 2 DNA topoisomerase 6 subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00132};; Type II DNA topoisomerase VI subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; TaxID=
Type 2 DNA topoisomerase 6 subunit A id=5800437 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Type 2 DNA topoisomerase 6 subunit A
rifcsphigho2_02_scaffold_1831_10
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(11461..13266)
DNA (1806bp) protein (602aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] Tax=CG_Woesearch_02
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] id=5048468 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA topoisomerase VI, subunit B
rifcsphigho2_02_scaffold_1831_11
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(13358..13909)
DNA (552bp) protein (184aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsphigho2_02_scaffold_1831_12
unknown

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14072..14905
DNA (834bp) protein (278aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1831_trna_1
unknown

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comp(14930..15023)
DNA (94bp)
transferRNA
rifcsphigho2_02_scaffold_1831_13

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comp(15455..16045)
DNA (591bp) protein (197aa)
seg id=5042273 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46771.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_1831_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

16222..17421
DNA (1200bp) protein (400aa)
Putative GTPase, probable translation factor n=1 Tax=nanoarchaeote Nst1 RepID=R1E424_9ARCH id=5103591 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ychF; translation-associated GTPase; K06942 Tax=CG_Woesearch_02
hypothetical protein
rifcsphigho2_02_scaffold_1831_15
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(17691..18083)
DNA (393bp) protein (131aa)
Zn-ribbon containing protein Tax=RBG_13_Woesearchaeota_36_6_curated
Zn-ribbon containing protein id=5800623 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Zn-ribbon containing protein
rifcsphigho2_02_scaffold_1831_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(18201..18581)
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=CG_Woesearch_02
seg id=5800622 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_1831_17
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(18652..19284)
DNA (633bp) protein (211aa)
small GTP-binding protein; K06883 Tax=RBG_13_Woesearchaeota_36_6_curated
small GTP-binding protein; K06883 id=5044930 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Small GTP-binding protein
rifcsphigho2_02_scaffold_1831_18

Not on your lists

19450..19992
DNA (543bp) protein (181aa)
hypothetical protein
id=5799864 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61195.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_02_scaffold_1831_19
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

20191..20892
DNA (702bp) protein (234aa)
hypothetical protein
seg Tax=RBG_13_Woesearchaeota_36_6_curated
seg id=5799865 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_1831_20
RIFOXYD2_FULL_OD1_Magasanikbacteria_41_14_curated, Magasanikbacteria, Parcubacteria, Bacteria

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20959..21579
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00036C8A3B
lysine exporter protein LysE/YggA Tax=RIFOXYD2_FULL_OD1_Magasanikbacteria_41_14_curated
lysine exporter protein LysE/YggA
rifcsphigho2_02_scaffold_1831_21
unknown

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comp(21612..21857)
DNA (246bp) protein (82aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1831_22
Desulfurobacterium thermolithotrophum, Desulfurobacterium, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

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21983..22729
DNA (747bp) protein (249aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S313_DESTD
rifcsphigho2_02_scaffold_1831_23

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comp(22778..23500)
DNA (723bp) protein (241aa)
Transcriptional regulator TrmB {ECO:0000313|EMBL:KHO51360.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
transcriptional regulator TrmB
transcriptional regulator TrmB id=5241641 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_1831_24
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Berkelbacteria, Bacteria

Not on your lists

23777..24454
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AP89_FERAC
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Berkelbacteria_50_28_curated
hypothetical protein
rifcsphigho2_02_scaffold_1831_25
unknown

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24496..25194
DNA (699bp) protein (233aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1831_26
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

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25265..26302
DNA (1038bp) protein (346aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_46_25_curated
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] id=5043939 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
phosphoenolpyruvate synthase (EC:2.7.9.2)
rifcsphigho2_02_scaffold_1831_27
AR11, Woesearchaeaota, DPANN, Archaea

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comp(26566..27189)
DNA (624bp) protein (208aa)
hypothetical protein Tax=AR11
rifcsphigho2_02_scaffold_1831_28
unknown

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comp(27469..28278)
DNA (810bp) protein (270aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1831_29
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(28299..28535)
DNA (237bp) protein (79aa)
id=5044625 Tax=CG_Woesearch_03
id=5044625 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Displaying items 1-30 of 42 in total

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