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rifcsphigho2_02_scaffold_6897

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_6897_1
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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91..978
DNA (888bp) protein (296aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GHA5_SPICD rbh
dihydrodipicolinate synthase
rifcsphigho2_02_scaffold_6897_2
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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991..2289
DNA (1299bp) protein (433aa)
diaminopimelate decarboxylase (EC:4.1.1.20)
Orn/DAP/Arg decarboxylase family / TabA-like n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12Y77_METBU rbh
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
rifcsphigho2_02_scaffold_6897_3
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

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2595..3821
DNA (1227bp) protein (409aa)
LL-diaminopimelate aminotransferase (EC:2.6.1.83)
LL-diaminopimelate aminotransferase id=3448624 bin=GWC2_ACD39_50_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_ACD39_50_8 organism_group=ACD39
Tax=BJP_IG2102_ACD39_51_10
rifcsphigho2_02_scaffold_6897_4
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

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3818..5134
DNA (1317bp) protein (439aa)
aspartate kinase (EC:2.7.2.4) Tax=RBG_16_Planctomycetes_59_8_curated
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI0003791EAE
aspartate kinase
rifcsphigho2_02_scaffold_6897_5
R_OP11_Gottesmanbacteria_39_12b, Gottesmanbacteria, Microgenomates, Bacteria

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5136..6224
DNA (1089bp) protein (363aa)
aspartate-semialdehyde dehydrogenase; K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12b_curated
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KHE6_CLOPH
rifcsphigho2_02_scaffold_6897_6

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6348..8000
DNA (1653bp) protein (551aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1579373 species="Archaea.;" source=
Lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase id=5799840 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_6897_7
AR11, Woesearchaeaota, DPANN, Archaea

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8069..8413
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003763F0C
metalloprotease Tax=AR11
ATP-dependent Zn protease
rifcsphigho2_02_scaffold_6897_8
AR11, Woesearchaeaota, DPANN, Archaea

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8477..9559
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820E23
ribosomal protein S6 glutaminyl transferase; K05844 ribosomal protein S6 modification protein Tax=AR11
rimK; Ribosomal protein S6 modification protein
rifcsphigho2_02_scaffold_6897_9
AR11, Woesearchaeaota, DPANN, Archaea

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comp(9573..10751)
DNA (1179bp) protein (393aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=2 Tax=Desulfitobacterium hafniense RepID=PURA_DESHD
Adenylosuccinate synthetase Tax=AR11
rifcsphigho2_02_scaffold_6897_10

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11134..12177
DNA (1044bp) protein (348aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase; K06863 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.-] id=5045827 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase {ECO:0000256|HAMAP-Rule:MF_01163}; EC=6.3.4.23 {ECO:0000256|HAMAP-Rule:MF_01163};; 5-aminoimidazole-4-carboxamid
phosphoribosylaminoimidazolecarboxamide formyltransferase
rifcsphigho2_02_scaffold_6897_11
GWC2_Geobacteraceae_48_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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12178..12921
DNA (744bp) protein (248aa)
Tax=GWC2_Geobacteraceae_48_7_curated
rifcsphigho2_02_scaffold_6897_12
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

12925..14049
DNA (1125bp) protein (375aa)
ATP-utilizing enzymes of ATP-grasp superfamily (Probably carboligase) n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T917_9EURY
Putative 5-formaminoimidazole-4-carboxamide-1-(Beta)-D-ribofuranosyl 5'-monophosphate synthetase Tax=AR11
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
rifcsphigho2_02_scaffold_6897_13
R_OD1_57_28, Parcubacteria, Bacteria

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14051..15559
DNA (1509bp) protein (503aa)
GMP synthase, large subunit; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
guaA; GMP synthase (EC:6.3.5.2)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI00036FAA21
rifcsphigho2_02_scaffold_6897_14
unknown

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comp(15440..16606)
DNA (1167bp) protein (389aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6897_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16660..18195)
DNA (1536bp) protein (512aa)
phosphoribosyltransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14] id=5043659 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
amidophosphoribosyltransferase (EC:2.4.2.14)
amidophosphoribosyltransferase Tax=AR11
rifcsphigho2_02_scaffold_6897_16
unknown

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18381..19415
DNA (1035bp) protein (345aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6897_17
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19458..20765
DNA (1308bp) protein (436aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LR97_SYNAS
rifcsphigho2_02_scaffold_6897_18
unknown

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comp(20826..21647)
DNA (822bp) protein (274aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6897_19
unknown

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comp(21644..22963)
DNA (1320bp) protein (440aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6897_20
unknown

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comp(22993..23208)
DNA (216bp) protein (72aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6897_21
AR6, Pacearchaeaota, DPANN, Archaea

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comp(23165..24982)
DNA (1818bp) protein (606aa)
Non-specific serine/threonine protein kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBT9_9BACT
hypothetical protein Tax=AR6
SNF2-related protein
Displaying 21 items

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