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rifcsphigho2_02_scaffold_4482

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_4482_1

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comp(3..788)
DNA (786bp) protein (262aa)
Enoyl-[acyl-carrier protein] reductase I {ECO:0000313|EMBL:KHO50733.1}; EC=1.3.1.9 {ECO:0000313|EMBL:KHO50733.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
fabI; enoyl-ACP reductase (NADH) (EC:1.3.1.10 1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3P972_DEFDS
rifcsphigho2_02_scaffold_4482_2

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1163..2359
DNA (1197bp) protein (399aa)
Dihydrofolate synthase / folylpolyglutamate synthase {ECO:0000313|EMBL:KHO50876.1}; EC=6.3.2.12 {ECO:0000313|EMBL:KHO50876.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Folylpolyglutamate synthase (Fragment) n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U7E0_9EURY
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
rifcsphigho2_02_scaffold_4482_3

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2446..4797
DNA (2352bp) protein (784aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
Phosphoribosylformylglycinamidine synthase II; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] id=5045878 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
purL; phosphoribosylformylglycinamidine synthase II
rifcsphigho2_02_scaffold_4482_4
unknown

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4794..5441
DNA (648bp) protein (216aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4482_5

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5443..6210
DNA (768bp) protein (256aa)
phosphoribosylformylglycinamidine synthase I; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] id=5045877 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421};; Formyl
purQ; phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3)
rifcsphigho2_02_scaffold_4482_6
AR11, Woesearchaeaota, DPANN, Archaea

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6207..6650
DNA (444bp) protein (148aa)
Putative uncharacterized protein Tax=AR11
id=5045876 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_4482_7
unknown

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6647..6907
DNA (261bp) protein (87aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4482_8

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6904..7674
DNA (771bp) protein (257aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929};; 5-(carboxyam
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21 5.4.99.18)
phosphoribosylaminoimidazole carboxylase (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] id=5240827 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_4482_9

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7864..8829
DNA (966bp) protein (322aa)
scl:sce1051 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] id=98563 bin=ACD65 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=ACD65 organism_group=PER (Peregrinibacteria) organism_desc=PER
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};;
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
rifcsphigho2_02_scaffold_4482_10
unknown

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8954..9340
DNA (387bp) protein (129aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4482_11
AR11, Woesearchaeaota, DPANN, Archaea

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9387..10157
DNA (771bp) protein (257aa)
inositol monophosphatase (EC:3.1.3.25)
Inositol monophosphatase family protein Tax=AR11
Myo-inositol-1(Or 4)-monophosphatase id=3637663 bin=GWC2_Deltaproteobacteria_42_51 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
rifcsphigho2_02_scaffold_4482_12
unknown

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comp(10158..10700)
DNA (543bp) protein (181aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4482_13
AR11, Woesearchaeaota, DPANN, Archaea

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10822..12480
DNA (1659bp) protein (553aa)
fumarate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] id=5045869 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Fumarate lyase Tax=AR11
adenylosuccinate lyase
rifcsphigho2_02_scaffold_4482_14
unknown

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12500..12886
DNA (387bp) protein (129aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4482_15
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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12940..13734
DNA (795bp) protein (265aa)
Phosphomethylpyrimidine kinase n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A0X1_THESM
phosphomethylpyrimidine kinase
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:ACS89266.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus
rifcsphigho2_02_scaffold_4482_16
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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13802..14416
DNA (615bp) protein (205aa)
Thiamine pyrophosphokinase n=1 Tax=Beggiatoa alba B18LD RepID=I3CC85_9GAMM
Thiamine pyrophosphokinase {ECO:0000313|EMBL:EIJ41228.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.
thiamine pyrophosphokinase
rifcsphigho2_02_scaffold_4482_17
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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14413..15819
DNA (1407bp) protein (469aa)
hypothetical protein n=2 Tax=Nodosilinea nodulosa RepID=UPI0002F2AAC0
Na+/proline symporter {ECO:0000313|EMBL:KIF15315.1}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
sodium:solute symporter family protein 2
rifcsphigho2_02_scaffold_4482_18
unknown

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comp(15826..16110)
DNA (285bp) protein (95aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4482_19
R_PER_ii_55_13, PER-ii, Bacteria

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comp(16244..16609)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D952E6
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_PER_ii_55_13_curated
hypothetical protein
rifcsphigho2_02_scaffold_4482_20
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16606..17460)
DNA (855bp) protein (285aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNC9_METZD
Uncharacterized protein {ECO:0000313|EMBL:AHE65857.1}; TaxID=1268635 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensi
3-demethylubiquinone-9 3-methyltransferase
rifcsphigho2_02_scaffold_4482_21
R_OD1_Falkowbacteria_44_11, Falkowbacteria, Parcubacteria, Bacteria

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comp(17492..17878)
DNA (387bp) protein (129aa)
glyoxalase/bleomycin resistance protein/dioxygenase; K06996 Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_44_11_curated
Glyoxalase/bleomycin resistance protein/dioxygenase id=4084080 bin=GWF2_Bacteroidetes_40_13 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Glyoxalase/bleomycin resistance protein/dioxygenase
rifcsphigho2_02_scaffold_4482_22
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

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18194..19729
DNA (1536bp) protein (512aa)
putative type IV restriction endonuclease Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated
putative type IV restriction endonuclease id=5044436 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
type IV site-specific deoxyribonuclease Eco57I
Displaying 22 items

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