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rifcsphigho2_02_scaffold_10357

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_10357_1
unknown

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1..105
DNA (105bp) protein (35aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10357_2
CG_Woesearch_02, Woesearchaeota, Archaea

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156..815
DNA (660bp) protein (220aa)
peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] Tax=CG_Woesearch_02
peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] id=5043665 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Peptidyl-prolyl cis-trans isomerase
rifcsphigho2_02_scaffold_10357_3

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866..1951
DNA (1086bp) protein (362aa)
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
cell division protein FtsZ; K03531 cell division protein FtsZ id=5043664 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Cell division protein FtsZ
rifcsphigho2_02_scaffold_10357_4

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1953..2144
DNA (192bp) protein (64aa)
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins id=5043663 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1579365 species="Archaea.;" source="a
Preprotein translocase subunit Sss1
rifcsphigho2_02_scaffold_10357_5

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2395..2898
DNA (504bp) protein (168aa)
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
NusG antitermination factor id=5799592 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
LSU ribosomal protein L24A Rpl24A
rifcsphigho2_02_scaffold_10357_6
CG_Woesearch_02, Woesearchaeota, Archaea

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3023..3826
DNA (804bp) protein (268aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=CG_Woesearch_02
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5043660 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
LSU ribosomal protein L11P
rifcsphigho2_02_scaffold_10357_7
unknown

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3935..5209
DNA (1275bp) protein (425aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10357_8
unknown

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5206..5421
DNA (216bp) protein (72aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10357_9
unknown

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comp(5411..5896)
DNA (486bp) protein (162aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10357_10
AR11, Woesearchaeaota, DPANN, Archaea

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comp(5877..7001)
DNA (1125bp) protein (375aa)
hypothetical protein; K09716 hypothetical protein Tax=AR11
D-tyrosyl-tRNA(Tyr) deacylase id=5800658 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_10357_11
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7079..8143
DNA (1065bp) protein (355aa)
Potassium-dependent sodium-calcium exchanger n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12YQ8_METBU
Sodium:proton exchanger {ECO:0000313|EMBL:KGK98557.1}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides
K+-dependent Na+/Ca+ exchanger related-protein
rifcsphigho2_02_scaffold_10357_12
unknown

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comp(8153..8281)
DNA (129bp) protein (43aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10357_13
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

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8487..8900
DNA (414bp) protein (138aa)
Uncharacterized protein {ECO:0000313|EMBL:ELU16563.1, ECO:0000313|EnsemblMetazoa:CapteP121699}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida;
rifcsphigho2_02_scaffold_10357_14
AR4, Woesearchaeaota, DPANN, Archaea

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9040..9198
DNA (159bp) protein (53aa)
id=4541659 bin=PER_GWC2_41_7 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=AR4
rifcsphigho2_02_scaffold_10357_15

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9199..9540
DNA (342bp) protein (114aa)
id=5043594 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46570.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_10357_16
unknown

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9533..9625
DNA (93bp) protein (31aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10357_17
CG_Woesearch_02, Woesearchaeota, Archaea

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9627..12257
DNA (2631bp) protein (877aa)
cation-transporting ATPase A (EC:3.6.3.10); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=CG_Woesearch_02
calcium-translocating P-type ATPase (EC:3.6.3.8); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] id=5043592 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
cation-transporting ATPase A (EC:3.6.3.10)
Displaying 17 items

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