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rifcsphigho2_02_scaffold_3080

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_3080_1
unknown

Not on your lists

comp(145..786)
DNA (642bp) protein (214aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3080_2
unknown

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1337..1603
DNA (267bp) protein (89aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3080_3

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1688..2989
DNA (1302bp) protein (434aa)
DNA primase DnaG {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020821}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020820};; TaxID=1579365 species="Archaea.;" sourc
DNA primase id=5048471 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_3080_4

Not on your lists

3086..3640
DNA (555bp) protein (185aa)
RBBP; Putative esterase (EC:3.-.-.-)
Uncharacterized protein {ECO:0000313|EMBL:KHO53483.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
esterase; K07002 id=15191480 bin=GWC1_OP11_49_16_COMPLETE species=Rickettsia bellii genus=Rickettsia taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
rifcsphigho2_02_scaffold_3080_5
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3637..5010)
DNA (1374bp) protein (458aa)
Kelch motif family protein n=1 Tax=Trichomonas vaginalis RepID=A2EUZ9_TRIVA
TonB family protein Tax=AR11
GDSL-family lipase/acylhydrolase
rifcsphigho2_02_scaffold_3080_6

Not on your lists

comp(5012..6046)
DNA (1035bp) protein (345aa)
peptidyl-prolyl cis-trans isomerase SurA (EC:5.2.1.8)
PpiC-type peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:KHO50500.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
id=4071627 bin=GWF2_CPR3_35_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_CPR3_35_18 organism_group=CPR3
rifcsphigho2_02_scaffold_3080_7
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

6207..7538
DNA (1332bp) protein (444aa)
nucleotidyltransferase; K06915 Tax=AR11
hypothetical protein; K06915 id=5048473 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_3080_8

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comp(7520..7924)
DNA (405bp) protein (135aa)
hypothetical protein
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein id=5241001 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF59992.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_3080_9
unknown

Not on your lists

comp(7928..8359)
DNA (432bp) protein (144aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3080_10
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

8829..8981
DNA (153bp) protein (51aa)
id=5048386 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsphigho2_02_scaffold_3080_11
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

8982..9323
DNA (342bp) protein (114aa)
Nascent polypeptide-associated complex protein id=5800198 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Nascent polypeptide-associated complex protein Tax=AR15
nac; NagC family transcriptional regulator
rifcsphigho2_02_scaffold_3080_12
Pontibacillus yanchengensis, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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9366..9731
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Paenisporosarcina sp. HGH0030 RepID=S2YD16_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KGP72864.1}; TaxID=1385514 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus yanchengensis Y32.;"
rifcsphigho2_02_scaffold_3080_13
CG_Woesearch_01, Woesearchaeota, Archaea

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9791..10219
DNA (429bp) protein (143aa)
id=5800197 Tax=CG_Woesearch_01
rifcsphigho2_02_scaffold_3080_14
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

10203..10670
DNA (468bp) protein (156aa)
hypothetical protein
id=5800196 Tax=CG_Woesearch_01
id=5103666 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_02_scaffold_3080_15
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

10813..11325
DNA (513bp) protein (171aa)
id=5048391 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsphigho2_02_scaffold_3080_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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11327..11884
DNA (558bp) protein (186aa)
ydeN; putative sulfatase Tax=RBG_13_Pacearchaeota_36_9_curated
YdeN-like protein; K07002 id=5090802 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
ydeN; putative sulfatase
rifcsphigho2_02_scaffold_3080_17

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12377..12874
DNA (498bp) protein (166aa)
Marine sediment metagenome DNA, contig: S01H1_L06460 {ECO:0000313|EMBL:GAF76521.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
30S ribosomal protein S13P id=5799893 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S13
rifcsphigho2_02_scaffold_3080_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


12878..13585
DNA (708bp) protein (236aa)
30S ribosomal protein S4 n=2 Tax=Methanotorris RepID=F6BD43_METIK id=5103689 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S4P Tax=CG_Woesearch_02
30S ribosomal protein S4
rifcsphigho2_02_scaffold_3080_19
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


13588..13989
DNA (402bp) protein (134aa)
rps11p; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=CG_Woesearch_01
30S ribosomal protein S11 id=5799891 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S11
rifcsphigho2_02_scaffold_3080_20
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

13991..14788
DNA (798bp) protein (266aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=RBG_13_Woesearchaeota_36_6_curated
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=5049647 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit D
rifcsphigho2_02_scaffold_3080_trna_1
unknown

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14838..14923
DNA (86bp)
transferRNA
rifcsphigho2_02_scaffold_3080_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


15005..15367
DNA (363bp) protein (121aa)
50S ribosomal protein L18e n=1 Tax=Pyrococcus sp. ST04 RepID=I3RFT8_9EURY
50S ribosomal protein L15; K02883 large subunit ribosomal protein L18e Tax=CG_Woesearch_02
50S ribosomal protein L18e
rifcsphigho2_02_scaffold_3080_22

Not on your lists


15370..15786
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000361BC64
Marine sediment metagenome DNA, contig: S01H1_S00916 {ECO:0000313|EMBL:GAF93287.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L13P
rifcsphigho2_02_scaffold_3080_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


15783..16184
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363BEDB
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=CG_Woesearch_02
30S ribosomal protein S9
rifcsphigho2_02_scaffold_3080_24
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


16189..16386
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6); K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] Tax=RBG_13_Woesearchaeota_36_6_curated
DNA-directed RNA polymerase, subunit N id=5799921 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit N
rifcsphigho2_02_scaffold_3080_25
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

16634..17095
DNA (462bp) protein (154aa)
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=CG_CPR01_01
Ribose 5-phosphate isomerase B n=1 Tax=Aquifex aeolicus (strain VF5) RepID=O67211_AQUAE
ribose-5-phosphate isomerase B
rifcsphigho2_02_scaffold_3080_26
unknown

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17097..17564
DNA (468bp) protein (156aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3080_27
AR11, Woesearchaeaota, DPANN, Archaea

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comp(17770..18312)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037B74D7
UPF0290 protein Mfer_0208 Tax=AR11
hypothetical protein
rifcsphigho2_02_scaffold_3080_28
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18309..18956)
DNA (648bp) protein (216aa)
PHP domain protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E7P2_METEZ
phosphoresterase PHP domain-containing protein
PHP domain protein {ECO:0000313|EMBL:ADI74115.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evest
rifcsphigho2_02_scaffold_3080_29
RHI_OP11_Roizmanbacteria_36_11, Roizmannbacteria, Microgenomates, Bacteria

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comp(19080..19772)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI000360DE45
methyltransferase type 11 Tax=RIFCSPHIGHO2_12_FULL_OP11_Roizmanbacteria_36_11_curated
type 11 methyltransferase
Displaying items 1-30 of 42 in total

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