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rifcsphigho2_02_scaffold_1127

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_1127_1
AR11, Woesearchaeaota, DPANN, Archaea

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2..1036
DNA (1035bp) protein (345aa)
Dienelactone hydrolase-like enzyme n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYB6_METHD
Putative uncharacterized protein Tax=AR11
hydrolase
rifcsphigho2_02_scaffold_1127_2
unknown

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comp(1067..1333)
DNA (267bp) protein (89aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1127_3
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(1400..1759)
DNA (360bp) protein (120aa)
toprim domain protein Tax=RBG_13_Woesearchaeota_36_6_curated
TOPRIM domain-containing protein id=5050201 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
TOPRIM domain-containing protein
rifcsphigho2_02_scaffold_1127_4

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1813..3213
DNA (1401bp) protein (467aa)
hypothetical protein; K00992 [EC:2.7.7.-] id=5050202 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO44983.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_1127_5

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3453..4424
DNA (972bp) protein (324aa)
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5042300 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L3
rifcsphigho2_02_scaffold_1127_6

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4426..5232
DNA (807bp) protein (269aa)
50S ribosomal protein L4 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL4_NANEQ id=5103253 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS12015.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L4
rifcsphigho2_02_scaffold_1127_7
AR11, Woesearchaeaota, DPANN, Archaea

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5234..5494
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003624D48
50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=AR11
50S ribosomal protein L23P
rifcsphigho2_02_scaffold_1127_8

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5510..6220
DNA (711bp) protein (237aa)
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 id=5042303 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L2
rifcsphigho2_02_scaffold_1127_9

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6223..6606
DNA (384bp) protein (128aa)
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps19p; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=5042304 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rps19p; 30S ribosomal protein S19
rifcsphigho2_02_scaffold_1127_10

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6608..7177
DNA (570bp) protein (190aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=5042305 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rpl22p; 50S ribosomal protein L22
rifcsphigho2_02_scaffold_1127_11

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7174..7935
DNA (762bp) protein (254aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GQK3_9ZZZZ
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S3
rifcsphigho2_02_scaffold_1127_12

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7922..8155
DNA (234bp) protein (78aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 id=5042307 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L29
rifcsphigho2_02_scaffold_1127_13
CG_Woesearch_02, Woesearchaeota, Archaea

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8148..8456
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000367012D
translation initiation factor 1 (eif-1/sui1); K03113 translation initiation factor 1 Tax=CG_Woesearch_02
Protein translation factor SUI1-like protein
rifcsphigho2_02_scaffold_1127_14
CG_Woesearch_02, Woesearchaeota, Archaea

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8461..8697
DNA (237bp) protein (79aa)
ribonuclease P protein component 1 (EC:3.1.26.5); K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] Tax=CG_Woesearch_02
Ribonuclease P protein component 1 n=2 Tax=unclassified Thermoplasmatales RepID=M7TAC4_9EURY
rifcsphigho2_02_scaffold_1127_15

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8702..9127
DNA (426bp) protein (142aa)
30S ribosomal protein S17P n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VYH7_9EURY
30S ribosomal protein S17P {ECO:0000313|EMBL:AJS13339.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17
rifcsphigho2_02_scaffold_1127_16

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9130..9531
DNA (402bp) protein (134aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl14p; 50S ribosomal protein L14P; K02874 large subunit ribosomal protein L14 id=5042311 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L14P
rifcsphigho2_02_scaffold_1127_17

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9533..9949
DNA (417bp) protein (139aa)
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=5042312 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rpl24p; 50S ribosomal protein L24
rifcsphigho2_02_scaffold_1127_18
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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9955..10635
DNA (681bp) protein (227aa)
30S ribosomal protein S4e n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0T3_METPS
rps4e; 30S ribosomal protein S4e
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella palu
rifcsphigho2_02_scaffold_1127_19

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10637..11167
DNA (531bp) protein (177aa)
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=5042314 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L5
rifcsphigho2_02_scaffold_1127_20
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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11157..11387
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003729D23
hypothetical protein; K02954 small subunit ribosomal protein S14 Tax=RBG_13_Woesearchaeota_36_6_curated
SSU ribosomal protein S14P
rifcsphigho2_02_scaffold_1127_21

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11397..11789
DNA (393bp) protein (131aa)
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8P; K02994 small subunit ribosomal protein S8 id=5042316 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S8
rifcsphigho2_02_scaffold_1127_22

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11791..12366
DNA (576bp) protein (192aa)
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS12005.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6 id=5800047 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rpl6p; 50S ribosomal protein L6
rifcsphigho2_02_scaffold_1127_23

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12367..12936
DNA (570bp) protein (190aa)
Large subunit ribosomal protein L32e {ECO:0000313|EMBL:KHO51172.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
50S ribosomal protein L32; K02912 large subunit ribosomal protein L32e id=5042318 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L32e
rifcsphigho2_02_scaffold_1127_24
CG_Woesearch_02, Woesearchaeota, Archaea

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12942..13391
DNA (450bp) protein (150aa)
LSU ribosomal protein l19e; K02885 large subunit ribosomal protein L19e Tax=CG_Woesearch_02
ribosomal protein L19e; K02885 large subunit ribosomal protein L19e id=5041777 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L19e
rifcsphigho2_02_scaffold_1127_25

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13388..13969
DNA (582bp) protein (194aa)
50S ribosomal protein L18P n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL18_NANEQ
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl18p; 50S ribosomal protein L18P
rifcsphigho2_02_scaffold_1127_26
CG_Woesearch_02, Woesearchaeota, Archaea

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13962..14747
DNA (786bp) protein (262aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 Tax=CG_Woesearch_02
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=5042321 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S5
rifcsphigho2_02_scaffold_1127_27
AR11, Woesearchaeaota, DPANN, Archaea

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14758..15213
DNA (456bp) protein (152aa)
ribosomal protein L30P; K02907 large subunit ribosomal protein L30 Tax=AR11
50S ribosomal protein L30P id=5800042 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ribosomal protein L30P
rifcsphigho2_02_scaffold_1127_28

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15224..15691
DNA (468bp) protein (156aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl15p; 50S ribosomal protein L15P; K02876 large subunit ribosomal protein L15 id=5042323 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L15P
rifcsphigho2_02_scaffold_1127_29

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15701..17116
DNA (1416bp) protein (472aa)
Protein translocase subunit SecY {ECO:0000256|RuleBase:RU000537}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
SecY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5041782 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Protein translocase subunit SecY
rifcsphigho2_02_scaffold_1127_30

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17146..17889
DNA (744bp) protein (248aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO51237.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Putative uncharacterized protein id=5042325 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Displaying items 1-30 of 48 in total

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