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rifcsphigho2_02_scaffold_1620

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_1620_1

Not on your lists

comp(3..464)
DNA (462bp) protein (154aa)
superoxide dismutase, Fe-Mn family (EC:1.15.1.1)
Superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] id=5240906 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_1620_2
R_Nitrospirae_40_19, Nitrospirae, Bacteria

Not on your lists

comp(715..2010)
DNA (1296bp) protein (432aa)
homoserine dehydrogenase (HDH): ThrA, MetL (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] Tax=RIFCSPHIGHO2_02_FULL_Nitrospirae_40_19_curated
hom; homoserine dehydrogenase Hom (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LFG1_THEPS
rifcsphigho2_02_scaffold_1620_3
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2122..2673
DNA (552bp) protein (184aa)
LemA protein {ECO:0000313|EMBL:AKB12079.1}; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila T
LemA family protein; K03744 LemA protein id=5048305 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
LemA protein
rifcsphigho2_02_scaffold_1620_4
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

2695..3591
DNA (897bp) protein (299aa)
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=AR9
heat shock protein HtpX (EC:3.4.24.-)
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] id=5241660 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_1620_5
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

3676..4122
DNA (447bp) protein (149aa)
hypothetical protein
Putative uncharacterized protein Tax=AR11
id=5048513 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_1620_6
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

4314..5000
DNA (687bp) protein (229aa)
hypothetical protein Tax=AR11
Putative uncharacterized protein id=5799950 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_1620_7
AR11, Woesearchaeaota, DPANN, Archaea

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comp(5255..5785)
DNA (531bp) protein (177aa)
transmembrane_regions id=5800310 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
rifcsphigho2_02_scaffold_1620_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5807..6430)
DNA (624bp) protein (208aa)
hypothetical protein
transmembrane_regions id=5042247 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
rifcsphigho2_02_scaffold_1620_9

Not on your lists

comp(6474..7055)
DNA (582bp) protein (194aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO51135.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
transmembrane_regions id=5042248 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_1620_10

Not on your lists

7291..7896
DNA (606bp) protein (202aa)
Translin {ECO:0000313|EMBL:KHO51314.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein id=5047338 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
RNA-binding protein of the translin family
rifcsphigho2_02_scaffold_1620_11
CG_Woesearch_02, Woesearchaeota, Archaea

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7893..9650
DNA (1758bp) protein (586aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=CG_Woesearch_02
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] id=5043742 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
rifcsphigho2_02_scaffold_1620_12

Not on your lists

comp(9738..10007)
DNA (270bp) protein (90aa)
Protein containing Nucleotide binding protein, PINc domain n=1 Tax=sediment metagenome RepID=D9PJC5_9ZZZZ
Protein containing Nucleotide binding protein, PINc domain {ECO:0000313|EMBL:EFK96340.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metageno
Protein containing Nucleotide binding protein, PINc protein
rifcsphigho2_02_scaffold_1620_13
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10145..10369)
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PJC6_9ZZZZ
hypothetical protein
Putative uncharacterized protein Tax=AR9
rifcsphigho2_02_scaffold_1620_14
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(10433..10834)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003707988
hypothetical protein Tax=CG_Pacearch_05
hypothetical protein
rifcsphigho2_02_scaffold_1620_15
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(10831..11421)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003816AF2
hypothetical protein
hypothetical protein Tax=CG_Woesearch_01
rifcsphigho2_02_scaffold_1620_16

Not on your lists


11505..12062
DNA (558bp) protein (186aa)
DITP/XTP pyrophosphatase {ECO:0000313|EMBL:KHO51307.1}; EC=3.6.1.19 {ECO:0000313|EMBL:KHO51307.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=NTPA_METKA
xanthosine triphosphate pyrophosphatase
rifcsphigho2_02_scaffold_1620_17
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

12101..12679
DNA (579bp) protein (193aa)
id=5045972 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
rifcsphigho2_02_scaffold_1620_18

Not on your lists

12894..13178
DNA (285bp) protein (95aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003702958
rifcsphigho2_02_scaffold_1620_19
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13179..13778
DNA (600bp) protein (200aa)
peptidylprolyl isomerase (EC:5.2.1.8); K01802 peptidylprolyl isomerase [EC:5.2.1.8] Tax=CG_Nomura_04
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FMV9_DESAA
cyclophilin type peptidyl-prolyl cis-trans isomerase
rifcsphigho2_02_scaffold_1620_20
unknown

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13775..13966
DNA (192bp) protein (64aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1620_21

Not on your lists

13957..15399
DNA (1443bp) protein (481aa)
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A {ECO:0000313|EMBL:KHO51304.1}; EC=6.3.5.6 {ECO:0000313|EMBL:KHO51304.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A (EC:6.3.5.6)
Glutamyl-tRNA(Gln) amidotransferase subunit A id=5799876 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_1620_22
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

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15392..15700
DNA (309bp) protein (103aa)
Tax=RBG_13_Euryarchaeota_31_8_curated
rifcsphigho2_02_scaffold_1620_23
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

15682..15993
DNA (312bp) protein (104aa)
Tax=RBG_13_Euryarchaeota_31_8_curated
rifcsphigho2_02_scaffold_1620_24
unknown

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15995..16336
DNA (342bp) protein (114aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1620_25
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

16333..17241
DNA (909bp) protein (303aa)
hypothetical protein Tax=CG_Woesearch_01
alias=gwa2_scaffold_1344_69 id=18248260 bin=AR5_curated_draft species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rifcsphigho2_02_scaffold_1620_26
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

17381..17572
DNA (192bp) protein (64aa)
Succinyl-CoA synthetase (Alpha subunit) Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_1620_27

Not on your lists

17725..19137
DNA (1413bp) protein (471aa)
glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] id=5044939 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B (EC:6.3.5.6)
rifcsphigho2_02_scaffold_1620_28
unknown

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19139..19468
DNA (330bp) protein (110aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1620_29
Polysphondylium pallidum, Polysphondylium, Dictyosteliida, Eukaryota

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comp(19490..19714)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI00036963AC
Uncharacterized protein {ECO:0000313|EMBL:EFA75938.1}; TaxID=13642 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Polysphondylium.;" source="Polysphondylium pallidum (Cellular slime mold).;
rifcsphigho2_02_scaffold_1620_30
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19725..20936)
DNA (1212bp) protein (404aa)
Rad32-like protein; K06915 Tax=AR11
DNA double-strand break repair protein Mre11 id=5799870 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Metallophosphoesterase
Displaying items 1-30 of 57 in total

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