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rifcsphigho2_02_scaffold_169

Search features with annotation key words

Displaying items 1-30 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_169_1
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

1..507
DNA (507bp) protein (169aa)
Probable tyrosine recombinase XerC-like id=4933087 bin=GWA2_Ignavibacteria-rel_35_8 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
integrase/recombinase xerd, integrase/recombinase XerD
xerD-like; integrase/recombinase xerd; K04763 integrase/recombinase XerD Tax=AR10
rifcsphigho2_02_scaffold_169_2
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

721..1086
DNA (366bp) protein (122aa)
hypothetical protein
Putative uncharacterized protein id=4933086 bin=GWA2_Ignavibacteria-rel_35_8 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
PRC-barrel Tax=AR10
rifcsphigho2_02_scaffold_169_3

Not on your lists

1249..1836
DNA (588bp) protein (196aa)
hypothetical protein
seg id=5241568 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60559.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_169_4
unknown

Not on your lists

comp(1880..2488)
DNA (609bp) protein (203aa)

This feature has no annotations

rifcsphigho2_02_scaffold_169_5
unknown

Not on your lists

comp(2541..2885)
DNA (345bp) protein (115aa)

This feature has no annotations

rifcsphigho2_02_scaffold_169_6
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(2986..3453)
DNA (468bp) protein (156aa)
hypothetical protein
id=5241570 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
rifcsphigho2_02_scaffold_169_trna_9
unknown

Not on your lists

comp(3961..4055)
DNA (95bp)
transferRNA
rifcsphigho2_02_scaffold_169_7
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(4313..4846)
DNA (534bp) protein (178aa)
transcription initiation factor TFIIE subunit alpha
transcription factor TFIIE subunit alpha; K03136 transcription initiation factor TFIIE subunit alpha Tax=AR10
transcription factor TFIIE subunit alpha; K03136 transcription initiation factor TFIIE subunit alpha id=5241571 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_169_8

Not on your lists

comp(4907..5446)
DNA (540bp) protein (180aa)
hypothetical protein; K07254 tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] id=5241572 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
hypothetical protein
rifcsphigho2_02_scaffold_169_9
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

5542..6903
DNA (1362bp) protein (454aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] id=5241573 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=AR10
rifcsphigho2_02_scaffold_169_trna_1
unknown

Not on your lists

7015..7088
DNA (74bp)
transferRNA
rifcsphigho2_02_scaffold_169_trna_2
unknown

Not on your lists

7150..7260
DNA (111bp)
transferRNA
rifcsphigho2_02_scaffold_169_10
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

7301..8926
DNA (1626bp) protein (542aa)
lysyl-tRNA synthetase, class I (EC:6.1.1.6)
lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] id=5241588 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] Tax=AR10
rifcsphigho2_02_scaffold_169_trna_3
unknown

Not on your lists

8965..9038
DNA (74bp)
transferRNA
rifcsphigho2_02_scaffold_169_11

Not on your lists

9144..9782
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Saccharibacter floricola RepID=UPI0003614ED8
Marine sediment metagenome DNA, contig: S01H1_S20213 {ECO:0000313|EMBL:GAG27507.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_02_scaffold_169_12
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

9871..11985
DNA (2115bp) protein (705aa)
hypothetical protein
transmembrane_regions id=5241587 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
transmembrane_regions Tax=AR10
rifcsphigho2_02_scaffold_169_13
unknown

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comp(11991..12236)
DNA (246bp) protein (82aa)

This feature has no annotations

rifcsphigho2_02_scaffold_169_14
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(12264..13004)
DNA (741bp) protein (247aa)
hypothetical protein
hypothetical protein id=5241590 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein Tax=AR10
rifcsphigho2_02_scaffold_169_15
unknown

Not on your lists

comp(13088..14989)
DNA (1902bp) protein (634aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003740DAE
GTP pyrophosphokinase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3A9Z8_CARHZ Tax=AR20
GTP pyrophosphokinase
rifcsphigho2_02_scaffold_169_16

Not on your lists

15043..15738
DNA (696bp) protein (232aa)
triosephosphate isomerase TIM (EC:5.3.1.1)
triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] id=5241598 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000256|HAMAP-
rifcsphigho2_02_scaffold_169_17
Thermococcus sp. AM4, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

15810..16940
DNA (1131bp) protein (377aa)
Dehydrogenase n=1 Tax=Thermococcus sp. AM4 RepID=B7QZZ7_9EURY
dehydrogenase
Dehydrogenase {ECO:0000313|EMBL:EEB74933.1}; TaxID=246969 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. AM4.;"
rifcsphigho2_02_scaffold_169_18
unknown

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comp(16946..17185)
DNA (240bp) protein (80aa)

This feature has no annotations

rifcsphigho2_02_scaffold_169_19

Not on your lists

comp(17402..18409)
DNA (1008bp) protein (336aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN22300.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Similar to molybdopterin cofactor synthesis protein MoaA id=2881446 bin=GWF2_OP3_43_52 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
radical SAM protein
rifcsphigho2_02_scaffold_169_20
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

18977..19231
DNA (255bp) protein (85aa)
hypothetical protein
hypothetical protein id=5241309 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein Tax=AR10
rifcsphigho2_02_scaffold_169_21

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comp(19329..20279)
DNA (951bp) protein (317aa)
radA; DNA repair protein RadA
radA; DNA repair and recombination protein RadA; K04483 DNA repair protein RadA id=5241615 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_169_22
unknown

Not on your lists

20445..21077
DNA (633bp) protein (211aa)

This feature has no annotations

rifcsphigho2_02_scaffold_169_23

Not on your lists

comp(21142..22455)
DNA (1314bp) protein (438aa)
replication factor A1
nucleic acid binding OB-fold tRNA/helicase-type; K07466 replication factor A1 id=5241616 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Replication factor A1 {ECO:0000313|EMBL:AJF60607.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_169_24
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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22565..23224
DNA (660bp) protein (220aa)
Zn-dependent hydrolase, including glyoxylase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TBC5_9EURY
Zn-dependent hydrolase, including glyoxylase
Zn-dependent hydrolase, including glyoxylase {ECO:0000313|EMBL:AGN26728.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomas
rifcsphigho2_02_scaffold_169_25
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

23257..24042
DNA (786bp) protein (262aa)
geranylgeranylglyceryl phosphate synthase; K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-] id=5241617 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
geranylgeranylglyceryl phosphate synthase; K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-] Tax=AR10
hypothetical protein
rifcsphigho2_02_scaffold_169_26
unknown

Not on your lists

comp(24055..24507)
DNA (453bp) protein (151aa)

This feature has no annotations

Displaying items 1-30 of 176 in total

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