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rifcsphigho2_02_scaffold_5572

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_5572_1

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comp(1..5436)
DNA (5436bp) protein (1812aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO55751.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
transmembrane_regions id=5241251 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_5572_2
unknown

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comp(5609..5815)
DNA (207bp) protein (69aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5572_3

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comp(5830..8475)
DNA (2646bp) protein (882aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO55612.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
transmembrane_regions id=5241600 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_5572_4
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(8481..9176)
DNA (696bp) protein (232aa)
Putative uncharacterized protein id=4523387 bin=GWC2_Nitrospirae_57_13 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
rifcsphigho2_02_scaffold_5572_5
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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9343..10341
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003738249 rbh
thiamine biosynthesis protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
rifcsphigho2_02_scaffold_5572_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10472..11845
DNA (1374bp) protein (458aa)
Archaeal ATPase, fused to C-terminal DUF234 domain n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A0E0_THESM
ATPase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
rifcsphigho2_02_scaffold_5572_7
R_WOR_1_46_20, WOR-1, Bacteria

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comp(11977..14646)
DNA (2670bp) protein (890aa)
heavy-metal transporting P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Cu2+-exporting ATPase (EC:3.6.3.4)
Heavy-metal transporting P-type ATPase id=5800398 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_5572_8
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(14724..15548)
DNA (825bp) protein (275aa)
heavy metal transport/detoxification protein Tax=RBG_16_Micrarchaeota_36_9_curated
heavy metal transport/detoxification protein id=15189456 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
putative copper-transporting P-type ATPase
rifcsphigho2_02_scaffold_5572_9

Not on your lists

comp(15874..16083)
DNA (210bp) protein (70aa)
Marine sediment metagenome DNA, contig: S01H4_L02311 {ECO:0000313|EMBL:GAG68084.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_02_scaffold_5572_10
unknown

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comp(16150..16374)
DNA (225bp) protein (75aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5572_11
unknown

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comp(16396..16863)
DNA (468bp) protein (156aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5572_12

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comp(16865..17701)
DNA (837bp) protein (279aa)
hypothetical protein
id=5045883 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46228.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_5572_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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17828..18190
DNA (363bp) protein (121aa)
Predicted transcription regulator, penicillinase repressor family n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A3Y7_THESM
transcription regulator, penicillinase repressor family; K07737 putative transcriptional regulator Tax=RBG_13_Bathyarchaeota_38_9_curated
transcription regulator, penicillinase repressor family
rifcsphigho2_02_scaffold_5572_14
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

18236..18943
DNA (708bp) protein (236aa)
peptidase M48 Ste24p Tax=AR11
rifcsphigho2_02_scaffold_5572_15
R_RIF_OD1_03_45_10, RIF-OD1-3, Parcubacteria, Bacteria

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19031..20191
DNA (1161bp) protein (387aa)
cytochrome c biogenesis transmembrane protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_45_10_curated
cytochrome c biogenesis transmembrane protein
cytochrome c biogenesis transmembrane protein id=5240647 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_5572_16
RBG_13_OP11_Woesebacteria_46_13_curated, Woesebacteria, Microgenomates, Bacteria

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20173..20562
DNA (390bp) protein (130aa)
hypothetical protein
Putative uncharacterized protein id=2898907 bin=PER_GWC2_41_7 species=Legionella drancourtii genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Putative uncharacterized protein Tax=RBG_13_OP11_Woesebacteria_46_13_curated
rifcsphigho2_02_scaffold_5572_17
unknown

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20559..20666
DNA (108bp) protein (36aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5572_18
AR4, Woesearchaeaota, DPANN, Archaea

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20647..21111
DNA (465bp) protein (155aa)
hypothetical protein
seg id=5041713 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
seg Tax=AR4
rifcsphigho2_02_scaffold_5572_19
R_RIF_OD1_03_45_10, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

21108..21353
DNA (246bp) protein (82aa)
id=5103497 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_45_10_curated
rifcsphigho2_02_scaffold_5572_20

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21372..22199
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00037B5D08
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO54196.1}; Flags: Fragment;; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
rifcsphigho2_02_scaffold_5572_21
R_WOR_2_67_20, WOR-2, Bacteria

Not on your lists

22313..23017
DNA (705bp) protein (235aa)
Rhodanese domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_67_20_curated
ArsR family transcriptional regulator
Sulfurtransferase id=4030441 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
rifcsphigho2_02_scaffold_5572_22
unknown

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23037..23279
DNA (243bp) protein (81aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5572_23
unknown

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comp(23400..23870)
DNA (471bp) protein (157aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5572_24
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(24016..24324)
DNA (309bp) protein (103aa)
Nitric oxide dioxygenase (EC:1.14.12.17) Tax=RBG_16_Micrarchaeota_36_9_curated
nitric oxide dioxygenase (EC:1.14.12.17) id=96529 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
nitric oxide dioxygenase (EC:1.14.12.17)
rifcsphigho2_02_scaffold_5572_25

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comp(24337..24537)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000377C0D3
Uncharacterized protein {ECO:0000313|EMBL:KHO54449.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
rifcsphigho2_02_scaffold_5572_26
R_OD1_Falkowbacteria_39_33, Falkowbacteria, Parcubacteria, Bacteria

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comp(24565..25227)
DNA (663bp) protein (221aa)
id=4071627 Tax=RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_39_33_curated
id=4071627 bin=GWF2_CPR3_35_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_CPR3_35_18 organism_group=CPR3
rifcsphigho2_02_scaffold_5572_27

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25351..25728
DNA (378bp) protein (126aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO54292.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
AF0104/ALDC/Ptd012-like id=5241030 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_5572_28
unknown

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comp(25761..25916)
DNA (156bp) protein (52aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5572_29
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(25967..27832)
DNA (1866bp) protein (622aa)
PKD domain containing protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JFC0_ANAD2
PKD domain protein {ECO:0000313|EMBL:GAO03669.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" sourc
hypothetical protein
rifcsphigho2_02_scaffold_5572_30
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27911..29221)
DNA (1311bp) protein (437aa)
Putative transporter (NRAMP family) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8Z5_UNCMA
Divalent metal cation transporter MntH {ECO:0000313|EMBL:GAM10637.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geo
transport protein
Displaying items 1-30 of 38 in total

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