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rifcsphigho2_02_scaffold_3028

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_3028_1

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1..1239
DNA (1239bp) protein (413aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1579379 species="Archaea.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=5241268 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
rifcsphigho2_02_scaffold_3028_2
unknown

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1248..2282
DNA (1035bp) protein (345aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3028_3
unknown

Not on your lists

2462..2950
DNA (489bp) protein (163aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3028_trna_1
unknown

Not on your lists

3015..3104
DNA (90bp)
transferRNA
rifcsphigho2_02_scaffold_3028_4

Not on your lists

3159..3386
DNA (228bp) protein (76aa)
hypothetical protein
hypothetical protein id=5241112 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60103.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_3028_5
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3383..3625
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSN0_METAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM04205.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina ac
rifcsphigho2_02_scaffold_3028_6
unknown

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3725..4186
DNA (462bp) protein (154aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3028_7
unknown

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4232..4654
DNA (423bp) protein (141aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3028_8
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4694..5167
DNA (474bp) protein (158aa)
lipoprotein Tax=CG_Delta_07
rifcsphigho2_02_scaffold_3028_9
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

5228..5905
DNA (678bp) protein (226aa)
ribose 5-phosphate isomerase A (EC:5.3.1.6)
ribose 5-phosphate isomerase (EC:5.3.1.6); K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] id=5241270 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
ribose 5-phosphate isomerase (EC:5.3.1.6); K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] Tax=AR10
rifcsphigho2_02_scaffold_3028_10
unknown

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comp(6138..7055)
DNA (918bp) protein (306aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3028_11
unknown

Not on your lists

comp(7048..7194)
DNA (147bp) protein (49aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3028_12
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

7438..14844
DNA (7407bp) protein (2469aa)
hypothetical protein
transmembrane_regions id=5241251 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
transmembrane_regions Tax=AR10
rifcsphigho2_02_scaffold_3028_13
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14884..15570
DNA (687bp) protein (229aa)
Putative membrane protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LI86_ACEWD
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFA49786.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain
rifcsphigho2_02_scaffold_3028_14
GWF2_OP11_38_9, Pacebacteria, Microgenomates, Bacteria

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15578..15901
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6CS29_BACAZ id=5087837 bin=OP11_3 species=Bacillus azotoformans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKQ88741.1}; TaxID=1618472 species="Bacteria; Microgenomates.;" source="Microgenomates (Pacebacteria) bacterium GW2011_GWF2_38_9.;"
rifcsphigho2_02_scaffold_3028_trna_2
unknown

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16084..16158
DNA (75bp)
transferRNA
rifcsphigho2_02_scaffold_3028_15
unknown

Not on your lists

16202..16405
DNA (204bp) protein (68aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3028_16
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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16402..16680
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6P929_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ50440.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum
rifcsphigho2_02_scaffold_3028_17

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16701..17309
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O30035_ARCFU
Uncharacterized protein {ECO:0000313|EMBL:KHO55109.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein
rifcsphigho2_02_scaffold_3028_18
unknown

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comp(17293..17937)
DNA (645bp) protein (215aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3028_19
unknown

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18136..18282
DNA (147bp) protein (49aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3028_20

Not on your lists

18275..19426
DNA (1152bp) protein (384aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO54595.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
id=5103465 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_02_scaffold_3028_trna_3
unknown

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comp(19338..19409)
DNA (72bp)
transferRNA
rifcsphigho2_02_scaffold_3028_21
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(19477..21072)
DNA (1596bp) protein (532aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O27968_ARCFU rbh
putative Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:AIG99326.1}; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgi
rifcsphigho2_02_scaffold_3028_22
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

21172..21663
DNA (492bp) protein (164aa)
transcription regulator, MarR family Tax=RBG_16_Micrarchaeota_36_9_curated
Transcription regulator, MarR family protein id=3400140 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
MarR family transcriptional regulator
rifcsphigho2_02_scaffold_3028_23
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

21678..22118
DNA (441bp) protein (147aa)
hypothetical protein
Protein of unknown function DUF2666 id=5241282 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Protein of unknown function DUF2666 Tax=AR10
rifcsphigho2_02_scaffold_3028_24
Candidatus Parvarchaeum acidophilus, Candidatus Parvarchaeum, Parvarchaeota, Archaea

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22327..22611
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GWI9_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EFD92423.1}; TaxID=662762 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidophilus ARMAN-5.;"
hypothetical protein
rifcsphigho2_02_scaffold_3028_25
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

22604..22948
DNA (345bp) protein (115aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
hypothetical protein id=5241183 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_3028_26

Not on your lists

22996..23850
DNA (855bp) protein (285aa)
phosphoesterase PA-phosphatase-like protein
phosphoesterase PA-phosphatase-like protein id=5241290 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:AJF60281.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_3028_27
Thermococcus kodakarensis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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23936..24241
DNA (306bp) protein (102aa)
Capsular polysaccharide biosynthesis protein n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JJ25_THEKO
capsular polysaccharide biosynthesis protein
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:BAD85908.1}; TaxID=69014 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococ
Displaying 30 items

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