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rifcsphigho2_02_scaffold_3610

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_3610_1
RLO_OD1_Falkowbacteria_45_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2..241)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PHH6_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteria_45_13_curated
rifcsphigho2_02_scaffold_3610_2

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294..797
DNA (504bp) protein (168aa)
Protease I {ECO:0000313|EMBL:KHO55652.1}; EC=3.2.-.- {ECO:0000313|EMBL:KHO55652.1};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
ThiJ/PfpI domain-containing protein n=1 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GA90_SPITZ
ThiJ/PfpI domain-containing protein
rifcsphigho2_02_scaffold_3610_3
GWF2_OD1_40_10, Parcubacteria, Bacteria

Not on your lists

807..1193
DNA (387bp) protein (129aa)
metallopeptidase
metallopeptidase id=5241554 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Metallopeptidase {ECO:0000313|EMBL:KKR36707.1}; TaxID=1618964 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_40_10.;"
rifcsphigho2_02_scaffold_3610_4
unknown

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comp(1210..1653)
DNA (444bp) protein (148aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3610_trna_1
unknown

Not on your lists

1810..1883
DNA (74bp)
transferRNA
rifcsphigho2_02_scaffold_3610_5
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

1954..6162
DNA (4209bp) protein (1403aa)
hypothetical protein
nucleotidyltransferase; K06915 id=5240983 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
nucleotidyltransferase; K06915 Tax=AR10
rifcsphigho2_02_scaffold_3610_6
unknown

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comp(6193..6498)
DNA (306bp) protein (102aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3610_7
GWA1_OP11_39_11, Levybacteria, Microgenomates, Bacteria

Not on your lists

6562..6987
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ94189.1}; TaxID=1618453 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA1_39_11.;"
alias=gwa2_scaffold_63_45 id=18248755 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rifcsphigho2_02_scaffold_3610_8
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

comp(7006..7683)
DNA (678bp) protein (226aa)
NUDIX hydrolase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YM72_9BACT
NUDIX hydrolase {ECO:0000313|EMBL:CCQ91588.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
isopentenyldiphosphate isomerase
rifcsphigho2_02_scaffold_3610_9
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7673..8104)
DNA (432bp) protein (144aa)
hypothetical protein PelgB_22142 n=1 Tax=Paenibacillus elgii B69 RepID=UPI000248C5B5 id=5087366 bin=GWF1_OP11_31_35_complete species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
putative hydrolase Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
NUDIX hydrolase
rifcsphigho2_02_scaffold_3610_10
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(8121..9818)
DNA (1698bp) protein (566aa)
hypothetical protein Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
Uncharacterized protein id=4749387 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
hypothetical protein
rifcsphigho2_02_scaffold_3610_11
GWB1_OP11_38_8, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(9887..10429)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036BE832
Metal dependent phosphohydrolase Tax=GWB1_OP11_38_8
HD superfamily hydrolase
rifcsphigho2_02_scaffold_3610_12

Not on your lists

comp(10568..10891)
DNA (324bp) protein (108aa)
Nucleotidyltransferase n=1 Tax=uncultured archaeon GZfos13E1 RepID=Q64E87_9ARCH
DNA polymerase beta protein {ECO:0000313|EMBL:KHO54768.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
DNA polymerase beta domain-containing protein region
rifcsphigho2_02_scaffold_3610_13
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

comp(10864..11250)
DNA (387bp) protein (129aa)
HEPN domain protein n=1 Tax=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) RepID=A4WJN8_PYRAR
hypothetical protein Tax=CG_Micra_06
HEPN domain-containing protein
rifcsphigho2_02_scaffold_3610_trna_2
unknown

Not on your lists

comp(11301..11464)
DNA (164bp)
transferRNA
rifcsphigho2_02_scaffold_3610_14

Not on your lists

comp(11479..12417)
DNA (939bp) protein (313aa)
hypothetical protein
coiled-coil id=5240993 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF59984.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_3610_15
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

12633..13568
DNA (936bp) protein (312aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermo
Proline iminopeptidase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WMM3_9EURY
mhpC; proline iminopeptidase
rifcsphigho2_02_scaffold_3610_16
unknown

Not on your lists

13607..16765
DNA (3159bp) protein (1053aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3610_17
Thermococcus paralvinellae, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(16829..17752)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LL48_THEBM
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF80035.1}; TaxID=582419 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus paralvinellae.;"
rifcsphigho2_02_scaffold_3610_18

Not on your lists

comp(17749..18381)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2W7_FERPA
Uncharacterized protein {ECO:0000313|EMBL:KKK97322.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
rifcsphigho2_02_scaffold_3610_19

Not on your lists

comp(18502..18768)
DNA (267bp) protein (89aa)
50S ribosomal protein L44e, large subunit ribosomal protein L44e
rpl44e; 50S ribosomal protein L44e; K02929 large subunit ribosomal protein L44e id=5240996 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L44e, large subunit ribosomal protein L44e {ECO:0000313|EMBL:AJF59987.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_3610_20
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

18973..19482
DNA (510bp) protein (170aa)
Putative nucleic acid-binding protein, contains PIN domain n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BF12_9EURY
Putative uncharacterized protein Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
putative nucleic acid-binding protein, contains PIN domain
rifcsphigho2_02_scaffold_3610_21
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19475..19801
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M671_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA41196.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
rifcsphigho2_02_scaffold_3610_22
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19861..20307)
DNA (447bp) protein (149aa)
heat-shock protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A8C625
Small heat shock protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
rifcsphigho2_02_scaffold_3610_23
unknown

Not on your lists

comp(20380..20997)
DNA (618bp) protein (206aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3610_24
unknown

Not on your lists

comp(21068..21442)
DNA (375bp) protein (125aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3610_25

Not on your lists

comp(21448..22161)
DNA (714bp) protein (238aa)
TIDP3108; LOC100282839 (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] id=5046353 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00011232}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00011232};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Displaying 27 items

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