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rifcsphigho2_02_scaffold_13723

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_13723_1
unknown

Not on your lists

comp(2..181)
DNA (180bp) protein (60aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13723_trna_1
unknown

Not on your lists

253..325
DNA (73bp)
transferRNA
rifcsphigho2_02_scaffold_13723_2
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria

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371..1147
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P2X0_DESSD
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated
hypothetical protein
rifcsphigho2_02_scaffold_13723_3
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(1164..2678)
DNA (1515bp) protein (505aa)
hypothetical protein
transmembrane_regions id=5240555 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
transmembrane_regions Tax=AR10
rifcsphigho2_02_scaffold_13723_4
unknown

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2769..3167
DNA (399bp) protein (133aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13723_5
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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3188..4474
DNA (1287bp) protein (429aa)
diaminopimelate decarboxylase (EC:4.1.1.20)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI0003746278 rbh
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
rifcsphigho2_02_scaffold_13723_6
unknown

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comp(4478..4825)
DNA (348bp) protein (116aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13723_7
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(4865..5284)
DNA (420bp) protein (140aa)
Ferritin Dps family protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2C9_FERPA
ferritin
Ferritin Dps family protein {ECO:0000313|EMBL:ADC66620.1}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (s
rifcsphigho2_02_scaffold_13723_8

Not on your lists

comp(5410..8007)
DNA (2598bp) protein (866aa)
ATP dependent helicase, lhr family; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=5240763 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
ATP-dependent helicase Lhr and Lhr-like protein helicase (EC:3.6.4.-)
ATP-dependent helicase Lhr and Lhr-like protein helicase {ECO:0000313|EMBL:AJF59755.1}; EC=3.6.4.- {ECO:0000313|EMBL:AJF59755.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_13723_9
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

8230..8802
DNA (573bp) protein (191aa)
LmbE family protein Tax=RBG_13_RIF_OD1_07_37_56_curated
LmbE family protein id=1899336 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
LmbE family protein
rifcsphigho2_02_scaffold_13723_10
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

8802..9947
DNA (1146bp) protein (382aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
Glycosyl transferase group 1 id=1899335 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
group 1 glycosyl transferase
rifcsphigho2_02_scaffold_13723_11
GWA2_Berkelbacteria_38_9, Berkelbacteria, Bacteria

Not on your lists

comp(10022..11218)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XD63_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKQ89955.1}; TaxID=1618334 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_38_9.;"
hypothetical protein
rifcsphigho2_02_scaffold_13723_12
unknown

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comp(11465..11860)
DNA (396bp) protein (132aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13723_13
R_RIF_OD1_07_48_27b, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(11857..12996)
DNA (1140bp) protein (380aa)
sucrose-phosphate phosphatase subfamily Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_48_27b_curated
Putative uncharacterized protein id=1827479 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
glycogen debranching protein
rifcsphigho2_02_scaffold_13723_14
Pyrobaculum islandicum, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(13003..13932)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00035E1C33
ribokinase-like domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ABL88288.1}; TaxID=384616 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobaculum islandicum (strain
rifcsphigho2_02_scaffold_13723_15
unknown

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comp(14023..14328)
DNA (306bp) protein (102aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13723_16
unknown

Not on your lists

14473..14691
DNA (219bp) protein (73aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13723_17
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

14925..15245
DNA (321bp) protein (107aa)
Putative daunorubicin resistance ABC transporter, ATP-binding protein n=1 Tax=uncultured archaeon RepID=D1JCD1_9ARCH
Putative daunorubicin resistance ABC transporter, ATP-binding protein Tax=S_Thermoanaerobacterales_50_218
daunorubicin resistance ABC transporter ATPase subunit
Displaying 18 items

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