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rifcsphigho2_02_scaffold_1304

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_1304_1
GWA2_OD1_41_14_partial, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2..571)
DNA (570bp) protein (190aa)
High-affinity iron transporter Tax=GWA2_OD1_41_14_partial
High-affinity iron transporter id=3682513 bin=GWB1_CP_36_13 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
high-affinity iron transporter
rifcsphigho2_02_scaffold_1304_2
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(593..790)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000377C0D3
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
rifcsphigho2_02_scaffold_1304_3
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(899..1039)
DNA (141bp) protein (47aa)
nrdD; anaerobic ribonucleoside-triphosphate reductase; K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2] Tax=CG_Micra_04
ribonucleoside triphosphate reductase (EC:1.17.4.2)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6SYK8_9CLOT
rifcsphigho2_02_scaffold_1304_4
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(1227..1538)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003790FC7
hypothetical protein
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:KKQ67519.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
rifcsphigho2_02_scaffold_1304_5

Not on your lists

comp(1580..2329)
DNA (750bp) protein (250aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
hypothetical protein
hypothetical protein; K07503 hypothetical protein id=5240786 bin=GW2011_AR10_complete species=unknown genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_1304_6
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

2400..3269
DNA (870bp) protein (290aa)
hypothetical protein
hypothetical protein Tax=RBG_16_Pacearchaeota_35_8_curated
transmembrane_regions 216..235 id=120041 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rifcsphigho2_02_scaffold_1304_7
unknown

Not on your lists

3336..3611
DNA (276bp) protein (92aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1304_8

Not on your lists

comp(3618..4685)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ARH6_FERAC
Proline dipeptidase {ECO:0000313|EMBL:AKA49528.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
rifcsphigho2_02_scaffold_1304_9
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4690..6480)
DNA (1791bp) protein (597aa)
leucyl aminopeptidase (EC:3.4.11.-)
hypothetical protein Tax=AR11
Thermophilic metalloprotease-like id=5800113 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_1304_10
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(6498..6662)
DNA (165bp) protein (55aa)
hypothetical protein
id=5240800 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
rifcsphigho2_02_scaffold_1304_11

Not on your lists

6748..7839
DNA (1092bp) protein (364aa)
hypothetical protein
DHH phosphoesterases id=5240803 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF59795.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_1304_12
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

7848..9203
DNA (1356bp) protein (452aa)
hypothetical protein
Uncharacterized protein id=5241626 bin=GW2011_AR10_complete species=Guillardia theta genus=Guillardia taxon_order=Pyrenomonadales taxon_class=Cryptophyta phylum=unknown tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein Tax=AR10
rifcsphigho2_02_scaffold_1304_13
unknown

Not on your lists

9307..9816
DNA (510bp) protein (170aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1304_14
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists

9836..10282
DNA (447bp) protein (149aa)
CMP/dCMP deaminase zinc-binding protein; K01493 dCMP deaminase [EC:3.5.4.12] Tax=RBG_13_WOR-2_44_8b_curated
CMP/dCMP deaminase zinc-binding n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GIL2_9FIRM
cytidine deaminase
rifcsphigho2_02_scaffold_1304_15
RBG_13_OD1_Falkowbacteria_39_14_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10347..11528)
DNA (1182bp) protein (394aa)
hypothetical protein Tax=RBG_13_OD1_Falkowbacteria_39_14_curated
Putative uncharacterized protein id=2189050 bin=GWE2_Firmicute_51_13 species=Clostridium hathewayi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein
rifcsphigho2_02_scaffold_1304_16
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

comp(11624..13327)
DNA (1704bp) protein (568aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003760ED3
PHP domain protein {ECO:0000313|EMBL:KKS65579.1}; TaxID=1618870 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_42_6.;"
PHP domain-containing protein
rifcsphigho2_02_scaffold_1304_17
R_RIF_OD1_03_52_15, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

13401..14096
DNA (696bp) protein (232aa)
UPI0003CFDC0A related cluster n=1 Tax=unknown RepID=UPI0003CFDC0A
putative methylase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_52_15_curated
methylase
rifcsphigho2_02_scaffold_1304_18
unknown

Not on your lists

comp(14102..14299)
DNA (198bp) protein (66aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1304_19
unknown

Not on your lists

comp(14476..14607)
DNA (132bp) protein (44aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1304_20
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

14811..15143
DNA (333bp) protein (111aa)
hypothetical protein
alias=gwa2_scaffold_63_240 id=18248953 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alias=gwa2_scaffold_63_240 Tax=AR5
rifcsphigho2_02_scaffold_1304_21
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists


15181..16656
DNA (1476bp) protein (492aa)
prolyl-tRNA synthetase (EC:6.1.1.16); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=CG_Pacearch_05
prolyl-tRNA synthetase (EC:6.1.1.16)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036AB39E
rifcsphigho2_02_scaffold_1304_22
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

16771..17394
DNA (624bp) protein (208aa)
protein of unknown function DUF88
Domain of unknown function DUF88 id=5241471 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Domain of unknown function DUF88 Tax=AR10
rifcsphigho2_02_scaffold_1304_23
R_OP11_Levybacteria_36_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(17402..17827)
DNA (426bp) protein (142aa)
Hydrolase, NUDIX family n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CT82_9FIRM
NUDIX hydrolase Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_36_15_curated
NUDIX hydrolase
rifcsphigho2_02_scaffold_1304_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(17841..18773)
DNA (933bp) protein (311aa)
thiamine pyrophosphate protein domain-containing protein; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] Tax=CG_Woesearch_02
Thiamine pyrophosphate protein domain protein TPP-binding protein n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S809_METSF
thiamine pyrophosphate protein domain protein TPP-binding protein
rifcsphigho2_02_scaffold_1304_25
Methanocaldococcus sp. JH146, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(18770..19909)
DNA (1140bp) protein (380aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RHG5_METVM
pyruvate ferredoxin oxidoreductase alpha subunit
Pyruvate ferredoxin oxidoreductase alpha subunit {ECO:0000313|EMBL:AIJ05008.1}; TaxID=1301915 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.
rifcsphigho2_02_scaffold_1304_26

Not on your lists

comp(19928..20215)
DNA (288bp) protein (96aa)
2-ketoisovalerate ferredoxin oxidoreductase subunit delta {ECO:0000313|EMBL:KHO55668.1}; EC=1.2.7.7 {ECO:0000313|EMBL:KHO55668.1};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
Pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BF19_METIK
pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta
rifcsphigho2_02_scaffold_1304_27

Not on your lists

comp(20222..20782)
DNA (561bp) protein (187aa)
Pyruvate ferredoxin oxidoreductase, gamma subunit {ECO:0000313|EMBL:KHO55669.1}; EC=1.2.7.1 {ECO:0000313|EMBL:KHO55669.1};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
Pyruvate/ketoisovalerate oxidoreductase common subunit gamma n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z1W1_METPS
pyruvate/ketoisovalerate oxidoreductase common subunit gamma
rifcsphigho2_02_scaffold_1304_28
CG_Omnitr_04, Omnitrophica, Bacteria

Not on your lists

20870..21163
DNA (294bp) protein (98aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=CG_Omnitr_04
acyP; acylphosphatase (EC:3.6.1.7)
Acylphosphatase id=2239120 bin=GWB2_Chloroflexi_49_20 species=Vulcanisaeta moutnovskia genus=Vulcanisaeta taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
rifcsphigho2_02_scaffold_1304_29
unknown

Not on your lists

comp(21180..21659)
DNA (480bp) protein (160aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1304_30
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(21711..22022)
DNA (312bp) protein (104aa)
hypothetical protein
hypothetical protein; K09728 hypothetical protein id=5240844 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein; K09728 hypothetical protein Tax=AR10
Displaying items 1-30 of 50 in total

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