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rifcsphigho2_02_scaffold_10370_15

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Diapherotrites_AR10_42_12

near complete RP 32 / 55 MC: 3 BSCG 22 / 51 ASCG 33 / 38 MC: 1
Location: 8595..9020

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7I2_METSW similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 140.0
  • Bit_score: 123
  • Evalue 1.80e-25
50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 140.0
  • Bit_score: 123
  • Evalue 5.20e-26
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methano similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 140.0
  • Bit_score: 123
  • Evalue 2.60e-25

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Taxonomy

Methanobacterium paludis → Methanobacterium → Methanobacteriales → Methanobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 426
ATGGAAAAAATCCTGATCGACGCTGAAAACCTTGTTTTCGGAAGAGTCGCAAGCATTGCAGCGCAGAAAGCTCTCCAGGGAACAGAGGTAAATATTGTCAATTCGGAAAAAACAATCCTTTCAGGAACAAAAGAATTCGTTTTAAAAAAATTCAGGCGCTGGATTAATATGAGGGGAAAGGGAAATCCCGAAAAAGGCCCTCAATACAGCAGAATGCCTGACAAAATCCTGCGCACAGCGATAAGAAAAATGCTCCCAAAAACAACACGCGGGGAAAAAGCGCTTGAAAGAGTAAAAGTTTTTATAGGCTTTCCTGAAGAATTTAAAAAACAGGCAACGGCGGAAATGCAGGCGGCAGTTCCCAAAAACCTGCAGAAAAGCGTTGTGCTCGGCGAAGCATGCAGGCTTCTGGGCGCGCGGTGGTAA
PROTEIN sequence
Length: 142
MEKILIDAENLVFGRVASIAAQKALQGTEVNIVNSEKTILSGTKEFVLKKFRRWINMRGKGNPEKGPQYSRMPDKILRTAIRKMLPKTTRGEKALERVKVFIGFPEEFKKQATAEMQAAVPKNLQKSVVLGEACRLLGARW*