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rifcsphigho2_02_scaffold_10370

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_10370_1
AR10, Diapherotrites, DPANN, Archaea

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1..513
DNA (513bp) protein (171aa)
50S ribosomal protein L19e, large subunit ribosomal protein L19e
rpl19e; 50S ribosomal protein L19e; K02885 large subunit ribosomal protein L19e id=5241369 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rpl19e; 50S ribosomal protein L19e; K02885 large subunit ribosomal protein L19e Tax=AR10
rifcsphigho2_02_scaffold_10370_2
Thermoproteus tenax, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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534..1115
DNA (582bp) protein (194aa)
50S ribosomal protein L18P n=1 Tax=Thermoproteus tenax (strain ATCC 35583 / NBRC 100435 / JCM 9277 / Kra 1) RepID=G4RLJ9_THETK
rpl18p; 50S ribosomal protein L18p
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=768679 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus
rifcsphigho2_02_scaffold_10370_3

Not on your lists


1158..1883
DNA (726bp) protein (242aa)
Small subunit ribosomal protein S5 {ECO:0000313|EMBL:KHO55773.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
30S ribosomal protein S5, small subunit ribosomal protein S5
rps5p; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=5241371 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_10370_4
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


1914..2369
DNA (456bp) protein (152aa)
50S ribosomal protein L30P, large subunit ribosomal protein L30
rpl30p; 50S ribosomal protein L30P; K02907 large subunit ribosomal protein L30 id=5241372 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rpl30p; 50S ribosomal protein L30P; K02907 large subunit ribosomal protein L30 Tax=AR10
rifcsphigho2_02_scaffold_10370_5

Not on your lists


2374..2838
DNA (465bp) protein (155aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L15, large subunit ribosomal protein L15
rpl15p; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 id=5241373 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_10370_6
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

2949..4232
DNA (1284bp) protein (428aa)
preprotein translocase subunit SecY
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5241374 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=AR10
rifcsphigho2_02_scaffold_10370_7

Not on your lists

4380..4886
DNA (507bp) protein (169aa)
hypothetical protein
hypothetical protein id=5241375 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60366.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_10370_8
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

4896..5234
DNA (339bp) protein (113aa)
large subunit ribosomal protein L34e
ribosomal protein L34e; K02915 large subunit ribosomal protein L34e id=5241376 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
ribosomal protein L34e; K02915 large subunit ribosomal protein L34e Tax=AR10
rifcsphigho2_02_scaffold_10370_9
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

5237..5461
DNA (225bp) protein (75aa)
ribosomal protein L14; K02875 large subunit ribosomal protein L14e Tax=AR10
large subunit ribosomal protein L14e
ribosomal protein L14; K02875 large subunit ribosomal protein L14e id=5241377 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_10370_10
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


5486..6004
DNA (519bp) protein (173aa)
small subunit ribosomal protein S13
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 id=5241378 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=AR10
rifcsphigho2_02_scaffold_10370_11

Not on your lists


6025..6723
DNA (699bp) protein (233aa)
30S ribosomal protein S4, small subunit ribosomal protein S4
rps4p; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=5241379 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_10370_12
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


6736..7119
DNA (384bp) protein (128aa)
small subunit ribosomal protein S11
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 id=5241380 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=AR10
rifcsphigho2_02_scaffold_10370_13
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

7151..7909
DNA (759bp) protein (253aa)
DNA-directed RNA polymerase subunit D (EC:2.7.7.6)
DNA-directed RNA polymerase subunit D (EC:2.7.7.6); K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=5241381 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase subunit D (EC:2.7.7.6); K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=AR10
rifcsphigho2_02_scaffold_10370_trna_1
unknown

Not on your lists

7927..8152
DNA (226bp)
transferRNA
rifcsphigho2_02_scaffold_10370_14
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


8214..8579
DNA (366bp) protein (122aa)
50S ribosomal protein L18e, large subunit ribosomal protein L18e
rpl18E; 50S ribosomal protein L18e; K02883 large subunit ribosomal protein L18e id=5241382 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rpl18E; 50S ribosomal protein L18e; K02883 large subunit ribosomal protein L18e Tax=AR10
rifcsphigho2_02_scaffold_10370_15
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


8595..9020
DNA (426bp) protein (142aa)
50S ribosomal protein L13 n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7I2_METSW
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methano
rifcsphigho2_02_scaffold_10370_16

Not on your lists


8993..9448
DNA (456bp) protein (152aa)
small subunit ribosomal protein S9
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=5241384 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S9 {ECO:0000256|RuleBase:RU003817}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_10370_17
Pyrococcus sp. ST04, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


9476..9673
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=1183377 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Ther
DNA-directed RNA polymerase subunit N n=2 Tax=Pyrococcus RepID=F4HJ15_PYRSN
DNA-directed RNA polymerase subunit N
rifcsphigho2_02_scaffold_10370_18

Not on your lists


9695..10411
DNA (717bp) protein (239aa)
small subunit ribosomal protein S2
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 id=5241386 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_10370_19
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

10429..11229
DNA (801bp) protein (267aa)
MEMO1 family protein Metev_0320 n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6M5_METEZ
hypothetical protein; K06990 Tax=CG_Micra_04
hypothetical protein
rifcsphigho2_02_scaffold_10370_20
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

11347..12090
DNA (744bp) protein (248aa)
hypothetical protein id=5241387 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
hypothetical protein Tax=AR10
rifcsphigho2_02_scaffold_10370_21
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

12133..13818
DNA (1686bp) protein (562aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] id=5241388 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=AR10
rifcsphigho2_02_scaffold_10370_22
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

13891..14082
DNA (192bp) protein (64aa)
Tax=CG_Micra_05
rifcsphigho2_02_scaffold_10370_23
Aeropyrum camini, Aeropyrum, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

14094..14300
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:BAN89832.1}; TaxID=1198449 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Aeropyrum.;" source="Aeropyrum camini SY1 = J
rifcsphigho2_02_scaffold_10370_24
R_OD1_Kaiserbacteria_54_22, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

14386..14532
DNA (147bp) protein (49aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_54_22_curated
rifcsphigho2_02_scaffold_10370_25
unknown

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14537..15151
DNA (615bp) protein (205aa)

This feature has no annotations

Displaying 26 items

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