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rifcsphigho2_02_scaffold_20301

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_20301_1

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153..878
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000381BFF6
Cell wall surface anchor family protein {ECO:0000313|EMBL:KHO55611.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
rifcsphigho2_02_scaffold_20301_2

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comp(875..1888)
DNA (1014bp) protein (338aa)
hypothetical protein id=5044164 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46679.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsphigho2_02_scaffold_20301_3
unknown

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comp(2707..3066)
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEX1_9ZZZZ id=5103294 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEX1_9ZZZZ Tax=AR20
hypothetical protein
rifcsphigho2_02_scaffold_20301_4
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(3248..3964)
DNA (717bp) protein (239aa)
Translation elongation factor P n=1 Tax=planctomycete KSU-1 RepID=I3IGD2_9PLAN
Translation elongation factor P {ECO:0000313|EMBL:GAB60777.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
rifcsphigho2_02_scaffold_20301_5
CG_Woesearch_02, Woesearchaeota, Archaea

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4256..5224
DNA (969bp) protein (323aa)
gcp; DNA-binding/iron metalloprotein/AP endonuclease; K15900 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=CG_Woesearch_02
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog id=5800645 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
protein kinase
rifcsphigho2_02_scaffold_20301_6
unknown

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5284..6084
DNA (801bp) protein (267aa)

This feature has no annotations

rifcsphigho2_02_scaffold_20301_7
unknown

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6202..6648
DNA (447bp) protein (149aa)

This feature has no annotations

rifcsphigho2_02_scaffold_20301_8
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(6649..6996)
DNA (348bp) protein (116aa)
Nucleic acid-binding, OB-fold-like Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsphigho2_02_scaffold_20301_trna_1
unknown

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7267..7338
DNA (72bp)
transferRNA
rifcsphigho2_02_scaffold_20301_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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7367..8572
DNA (1206bp) protein (402aa)
hypothetical protein; K08971 putative membrane protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein; K08971 putative membrane protein id=5048637 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_20301_10
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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8614..8871
DNA (258bp) protein (86aa)
Ribosomal protein L35AE/L33A n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WT03_9EURY
Ribosomal protein L35AE/L33A {ECO:0000313|EMBL:ENO12068.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
50S ribosomal protein L35Ae
rifcsphigho2_02_scaffold_20301_11
unknown

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8876..9625
DNA (750bp) protein (250aa)

This feature has no annotations

rifcsphigho2_02_scaffold_20301_12
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(9611..10393)
DNA (783bp) protein (261aa)
hypothetical protein Tax=CG_Woesearch_02
RNA-binding protein snRNP-like protein id=5043944 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
fibronectin-binding a domain-containing protein
rifcsphigho2_02_scaffold_20301_13
CG_Woesearch_01, Woesearchaeota, Archaea

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10550..11146
DNA (597bp) protein (199aa)
DNA-binding protein n=3 Tax=Pyrococcus RepID=Q8TZW3_PYRFU id=5103692 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein; K07572 putative nucleotide binding protein Tax=CG_Woesearch_01
DNA-binding protein
rifcsphigho2_02_scaffold_20301_14
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(11672..12439)
DNA (768bp) protein (256aa)
hypothetical protein; K05896 segregation and condensation protein A Tax=CG_Woesearch_01
condensin subunit ScpA; K05896 segregation and condensation protein A id=5048743 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Chromosome segregation and condensation protein ScpA
rifcsphigho2_02_scaffold_20301_trna_2
unknown

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12614..12686
DNA (73bp)
transferRNA
rifcsphigho2_02_scaffold_20301_trna_3
unknown

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12690..12773
DNA (84bp)
transferRNA
rifcsphigho2_02_scaffold_20301_15
unknown

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12930..13385
DNA (456bp) protein (152aa)

This feature has no annotations

rifcsphigho2_02_scaffold_20301_16
unknown

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comp(13412..14164)
DNA (753bp) protein (251aa)

This feature has no annotations

rifcsphigho2_02_scaffold_20301_17

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14430..14723
DNA (294bp) protein (98aa)
hypothetical protein
id=5048677 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45340.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Displaying 20 items

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