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rifcsphigho2_12_scaffold_18275

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_12_scaffold_18275_1
unknown

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2..3187
DNA (3186bp) protein (1062aa)
Lytic murein transglycosylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP id=5103087 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Lytic murein transglycosylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP Tax=AR20
Lytic murein transglycosylase
rifcsphigho2_12_scaffold_18275_2

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3162..5609
DNA (2448bp) protein (816aa)
Lytic murein transglycosylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP id=5103087 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Lytic murein transglycosylase
Lytic murein transglycosylase {ECO:0000313|EMBL:AJF62368.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_12_scaffold_18275_3
unknown

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5609..8932
DNA (3324bp) protein (1108aa)

This feature has no annotations

rifcsphigho2_12_scaffold_18275_4
unknown

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8948..9673
DNA (726bp) protein (242aa)

This feature has no annotations

rifcsphigho2_12_scaffold_18275_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(9726..10904)
DNA (1179bp) protein (393aa)
Multi-drug resistance protein Tax=RBG_13_Pacearchaeota_36_9_curated
major facilitator superfamily protein; K08161 MFS transporter, DHA1 family, multidrug resistance protein id=5091436 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
major facilitator transporter
rifcsphigho2_12_scaffold_18275_6
unknown

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comp(11313..13823)
DNA (2511bp) protein (837aa)

This feature has no annotations

rifcsphigho2_12_scaffold_18275_7
unknown

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comp(13913..14131)
DNA (219bp) protein (73aa)

This feature has no annotations

rifcsphigho2_12_scaffold_18275_8

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comp(14226..14603)
DNA (378bp) protein (126aa)
Small subunit ribosomal protein S8e {ECO:0000313|EMBL:KHO49188.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
SSU ribosomal protein s8e; K02995 small subunit ribosomal protein S8e id=5048696 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S8e
rifcsphigho2_12_scaffold_18275_9

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14736..14963
DNA (228bp) protein (76aa)
Sm ribonucleoprotein-like protein; K04796 small nuclear ribonucleoprotein id=5048697 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Small nuclear ribonucleoprotein {ECO:0000313|EMBL:KHO45360.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Like-Sm ribonucleoprotein core
rifcsphigho2_12_scaffold_18275_10
unknown

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15264..15437
DNA (174bp) protein (58aa)

This feature has no annotations

rifcsphigho2_12_scaffold_18275_11
unknown

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15434..16351
DNA (918bp) protein (306aa)
Transcription initiation factor IIB n=4 Tax=Archaeoglobaceae RepID=TF2B_ARCFU id=5103059 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcription initiation factor IIB n=4 Tax=Archaeoglobaceae RepID=TF2B_ARCFU Tax=AR20
Transcription initiation factor IIB
rifcsphigho2_12_scaffold_18275_12

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comp(16348..17244)
DNA (897bp) protein (299aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
RNAse Z n=1 Tax=nanoarchaeote Nst1 RepID=R1E5I6_9ARCH id=5103055 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNAse Z
rifcsphigho2_12_scaffold_18275_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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17292..17840
DNA (549bp) protein (183aa)
tRNA-splicing endonuclease subunit alpha; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=RBG_13_Woesearchaeota_36_6_curated
tRNA-intron endonuclease n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EE73_9EURY id=5103054 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
tRNA-intron endonuclease
rifcsphigho2_12_scaffold_18275_14

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17926..18345
DNA (420bp) protein (140aa)
hypothetical protein
id=5103053 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62334.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Displaying 14 items

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