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rifcsphigho2_12_scaffold_1905

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_12_scaffold_1905_1

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1..1182
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YTW3_MELRP id=5103290 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Marine sediment metagenome DNA, contig: S06H3_L00143 {ECO:0000313|EMBL:GAI04689.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_12_scaffold_1905_2
AR15, Woesearchaeaota, DPANN, Archaea

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1136..1486
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000368D8EA
hypothetical protein
Tax=AR15
rifcsphigho2_12_scaffold_1905_3
unknown

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comp(1489..2682)
DNA (1194bp) protein (398aa)

This feature has no annotations

rifcsphigho2_12_scaffold_1905_4
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2679..4397)
DNA (1719bp) protein (573aa)
id=5046879 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_12_scaffold_1905_5
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

4452..5003
DNA (552bp) protein (184aa)
serine/threonine protein kinase; K07176 putative serine/threonine protein kinase id=5046878 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
serine/threonine protein kinase; K07176 putative serine/threonine protein kinase Tax=AR18
hypothetical protein
rifcsphigho2_12_scaffold_1905_6

Not on your lists


comp(5173..5727)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003738263
30S ribosomal protein S3Ae {ECO:0000313|EMBL:KHO52749.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
SSU ribosomal protein S3AE
rifcsphigho2_12_scaffold_1905_7
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(5764..7089)
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003699C78
hypothetical protein; K07463 archaea-specific RecJ-like exonuclease Tax=CG_Woesearch_02
rifcsphigho2_12_scaffold_1905_8

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comp(7097..7552)
DNA (456bp) protein (152aa)
30S ribosomal protein S15/S13e n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L6T6_KORCO id=5103093 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S15/S13e
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_12_scaffold_1905_9
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(7835..8431)
DNA (597bp) protein (199aa)
O-sialoglycoprotein endopeptidase (EC:2.7.11.1 3.4.24.57); K15904 bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein [EC:2.7.11.1] Tax=RBG_16_Pacearchaeota_35_8_curated
O-sialoglycoprotein endopeptidase id=5800366 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_12_scaffold_1905_10
unknown

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8495..8989
DNA (495bp) protein (165aa)

This feature has no annotations

rifcsphigho2_12_scaffold_1905_11
unknown

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8998..9396
DNA (399bp) protein (133aa)

This feature has no annotations

rifcsphigho2_12_scaffold_1905_12
AR18, Woesearchaeaota, DPANN, Archaea

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comp(9386..10723)
DNA (1338bp) protein (446aa)
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 id=5050706 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 Tax=AR18
SRP54-type protein, GTPase protein
rifcsphigho2_12_scaffold_1905_13
unknown

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comp(10767..11621)
DNA (855bp) protein (285aa)

This feature has no annotations

rifcsphigho2_12_scaffold_1905_14
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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11733..12764
DNA (1032bp) protein (344aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
Putative uncharacterized protein id=4203361 bin=PER_GWC2_41_7 species=Phytophthora sojae genus=Phytophthora taxon_order=Peronosporales taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
rifcsphigho2_12_scaffold_1905_15
unknown

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comp(12756..12959)
DNA (204bp) protein (68aa)
Putative transposase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IND8_NITGG id=5102900 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative transposase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IND8_NITGG Tax=AR20
hypothetical protein
rifcsphigho2_12_scaffold_1905_16

Not on your lists

comp(13246..14310)
DNA (1065bp) protein (355aa)
Marine sediment metagenome DNA, contig: S03H2_L00267 {ECO:0000313|EMBL:GAH34806.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
ftsY; signal recognition particle receptor FtsY; K03110 fused signal recognition particle receptor id=5048740 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Signal recognition particle GTPase
rifcsphigho2_12_scaffold_1905_17
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14335..15123)
DNA (789bp) protein (263aa)
id=5050699 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_12_scaffold_1905_18
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15136..16053)
DNA (918bp) protein (306aa)
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5050697 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] Tax=AR18
tRNA pseudouridine synthase D TruD
rifcsphigho2_12_scaffold_1905_19
CG_Omnitr_01, Omnitrophica, Bacteria

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16188..17423
DNA (1236bp) protein (412aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1); K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=CG_Omnitr_01
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) n=1 Tax=sediment metagenome RepID=D9PEW1_9ZZZZ
rifcsphigho2_12_scaffold_1905_20

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17425..17862
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035CC37A
Nuclease SNase-like protein {ECO:0000313|EMBL:KHO52133.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
nuclease (SNase-like)
rifcsphigho2_12_scaffold_1905_21

Not on your lists

18082..18693
DNA (612bp) protein (204aa)
hypothetical protein
id=5050691 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53360.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsphigho2_12_scaffold_1905_22
unknown

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18833..19276
DNA (444bp) protein (148aa)

This feature has no annotations

rifcsphigho2_12_scaffold_1905_23
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

19283..19633
DNA (351bp) protein (117aa)
id=5050681 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_12_scaffold_1905_24
Candidatus Parvarchaeum acidiphilum, Candidatus Parvarchaeum, Parvarchaeota, Archaea

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19636..19806
DNA (171bp) protein (57aa)
30S ribosomal protein S27e n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEZ2_9EURY
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371}; TaxID=662760 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidiphilum ARMAN-4.;"
rps27e; 30S ribosomal protein S27
rifcsphigho2_12_scaffold_1905_25

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19809..20585
DNA (777bp) protein (259aa)
eif2A; translation initiation factor IF-2 subunit alpha; K03237 translation initiation factor 2 subunit 1 id=5050676 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Translation initiation factor 2 subunit 1 {ECO:0000313|EMBL:KHO53345.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Translation initiation factor 2 subunit alpha
rifcsphigho2_12_scaffold_1905_26
AR1, Pacearchaeaota, DPANN, Archaea

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comp(20774..21418)
DNA (645bp) protein (215aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] id=18248810 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR1
phage SPO1 DNA polymerase-related protein
rifcsphigho2_12_scaffold_1905_27
CG_Pacearch_01, Pacearchaeota, Archaea

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21508..22041
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036382BE
ppiA; peptidyl-prolyl cis-trans isomerase Tax=CG_Pacearch_01
ppiB; peptidyl-prolyl cis-trans isomerase
rifcsphigho2_12_scaffold_1905_28

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comp(22059..22547)
DNA (489bp) protein (163aa)
Ribosomal protein L31e n=1 Tax=uncultured marine crenarchaeote AD1000-325-A12 RepID=B3V5Q9_9ARCH id=5103296 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribosomal protein L31e
Ribosomal protein L31e {ECO:0000313|EMBL:AJF62577.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_12_scaffold_1905_29

Not on your lists

comp(22549..22722)
DNA (174bp) protein (58aa)
id=5044951 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54551.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsphigho2_12_scaffold_1905_30

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comp(22719..23126)
DNA (408bp) protein (136aa)
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
RPS19A; 30S ribosomal protein S19; K02966 small subunit ribosomal protein S19e id=5044953 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S19e
Displaying items 1-30 of 37 in total

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