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rifcsphigho2_12_scaffold_10715

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_12_scaffold_10715_1
unknown

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comp(3..164)
DNA (162bp) protein (54aa)

This feature has no annotations

rifcsphigho2_12_scaffold_10715_2

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comp(194..1912)
DNA (1719bp) protein (573aa)
hypothetical protein
id=5102909 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62190.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_12_scaffold_10715_3
CG_Pacearch_02, Pacearchaeota, Archaea

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comp(2028..2579)
DNA (552bp) protein (184aa)
Marine sediment metagenome DNA, contig: S06H3_S17196 Tax=CG_Pacearch_02
# 418848 # 419372 # -1 # ;gc_cont=0.448 id=18313437 bin=Nanosalina tax=Nanosalina
rifcsphigho2_12_scaffold_10715_4

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2613..3164
DNA (552bp) protein (184aa)
id=5049620 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53658.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsphigho2_12_scaffold_10715_5
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

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comp(3105..3674)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036FFB32
phosphoesterase PA-phosphatase-like protein Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
hypothetical protein
rifcsphigho2_12_scaffold_10715_6
AR18, Woesearchaeaota, DPANN, Archaea

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comp(3671..4519)
DNA (849bp) protein (283aa)
hypothetical protein id=5049621 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein Tax=AR18
hypothetical protein
rifcsphigho2_12_scaffold_10715_7
Pyrococcus sp. ST04, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(4574..4876)
DNA (303bp) protein (101aa)
50S ribosomal protein L12 n=1 Tax=Pyrococcus sp. ST04 RepID=I3RBQ2_9EURY
50S ribosomal protein L12
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1183377 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. ST04.;"
rifcsphigho2_12_scaffold_10715_8
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(4909..5748)
DNA (840bp) protein (280aa)
50S ribosomal protein L10 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVQ4_9EURY
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Therm
Ribosomal protein L10
rifcsphigho2_12_scaffold_10715_9

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comp(5745..6446)
DNA (702bp) protein (234aa)
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5047524 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L1 {ECO:0000313|EMBL:KHO45733.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L1
rifcsphigho2_12_scaffold_10715_10
GWC2_OD1_45_8, Magasanikbacteria, Parcubacteria, Bacteria

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6762..7157
DNA (396bp) protein (132aa)
NUDIX hydrolase {ECO:0000313|EMBL:KKU13782.1}; TaxID=1619050 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_45_8.;"
NUDIX hydrolase id=2716804 bin=GWC2_Elusimicrobia_64_44 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
rifcsphigho2_12_scaffold_10715_11
CG_Pacearch_02, Pacearchaeota, Archaea

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comp(7342..7596)
DNA (255bp) protein (85aa)
hypothetical protein Tax=CG_Pacearch_02
Putative uncharacterized protein id=5047308 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsphigho2_12_scaffold_10715_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(7574..7777)
DNA (204bp) protein (68aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
rifcsphigho2_12_scaffold_10715_13

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7942..8214
DNA (273bp) protein (91aa)
Probable transposase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DIS4_9BACT
Marine sediment metagenome DNA, contig: S06H3_L00615 {ECO:0000313|EMBL:GAI11698.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
rifcsphigho2_12_scaffold_10715_14
R_OD1_Falkowbacteria_47_11b, Falkowbacteria, Parcubacteria, Bacteria

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comp(8353..9528)
DNA (1176bp) protein (392aa)
major facilitator superfamily permease Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_47_11b_curated
Transporter, major facilitator family id=4492093 bin=GWC2_Bacteroidetes_33_15 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_33_15 organism_group=Bacteroidetes organism_desc=Good + rbh
major facilitator superfamily permease
rifcsphigho2_12_scaffold_10715_15
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(9797..10438)
DNA (642bp) protein (214aa)
Tax=AR13
rifcsphigho2_12_scaffold_10715_16
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10751..10873
DNA (123bp) protein (41aa)
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:EER67901.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EER67901.1};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Fami
Displaying 16 items

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