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rifcsphigho2_12_scaffold_20300

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_12_scaffold_20300_1

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3..1247
DNA (1245bp) protein (415aa)
Asparaginyl-tRNA synthetase {ECO:0000313|EMBL:KHO54542.1}; EC=6.1.1.22 {ECO:0000313|EMBL:KHO54542.1};; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Asparaginyl-tRNA synthetase n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGF4_ACIB4 id=5103855 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Asparaginyl-tRNA synthetase
rifcsphigho2_12_scaffold_20300_2
unknown

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1385..1498
DNA (114bp) protein (38aa)

This feature has no annotations

rifcsphigho2_12_scaffold_20300_3
unknown

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comp(1521..1679)
DNA (159bp) protein (53aa)

This feature has no annotations

rifcsphigho2_12_scaffold_20300_4
R_OD1_Wolfebacteria_45_10c, Wolfebacteria, Parcubacteria, Bacteria

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comp(1711..2181)
DNA (471bp) protein (157aa)
Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_45_10c_curated
rifcsphigho2_12_scaffold_20300_5
unknown

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comp(2214..2963)
DNA (750bp) protein (250aa)

This feature has no annotations

rifcsphigho2_12_scaffold_20300_6
unknown

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comp(3068..3313)
DNA (246bp) protein (82aa)

This feature has no annotations

rifcsphigho2_12_scaffold_20300_7
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(3351..4274)
DNA (924bp) protein (308aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5801419 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
rifcsphigho2_12_scaffold_20300_8

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comp(4217..5323)
DNA (1107bp) protein (369aa)
Aromatic amino acid permease {ECO:0000313|EMBL:KKT97544.1}; TaxID=1618931 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_15.;"
aromatic amino acid permease id=5045769 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tryptophan/tyrosine permease family
rifcsphigho2_12_scaffold_20300_9
RBG_13_OD1_48_8_curated, Parcubacteria, Bacteria

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comp(5561..6022)
DNA (462bp) protein (154aa)
vitamin K epoxide reductase Tax=RBG_13_OD1_48_8_curated
rifcsphigho2_12_scaffold_20300_10

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comp(6456..7325)
DNA (870bp) protein (290aa)
Thioredoxin reductase (trxB-3); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=5042292 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Thioredoxin reductase NADPH {ECO:0000313|EMBL:KHO46790.1}; EC=1.8.1.9 {ECO:0000313|EMBL:KHO46790.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Thioredoxin reductase TrxB-3
rifcsphigho2_12_scaffold_20300_11
CG_Caldi_01, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

Not on your lists

7530..7841
DNA (312bp) protein (104aa)
Tax=CG_Caldi_01
rifcsphigho2_12_scaffold_20300_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7846..9156)
DNA (1311bp) protein (437aa)
HsdR family type I site-specific deoxyribonuclease (EC:3.1.21.3)
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:AFU59834.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AFU59834.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrosos
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INR5_NITGG
Displaying 12 items

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