ggKbase home page

rifoxyc2_full_scaffold_1584

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyc2_full_scaffold_1584_1
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(104..616)
DNA (513bp) protein (171aa)
PEGA domain protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I5H0_METB6
WD40-domain containing protein Tax=CG_Micra_05
PEGA domain-containing protein
rifoxyc2_full_scaffold_1584_2
unknown

Not on your lists

comp(586..801)
DNA (216bp) protein (72aa)

This feature has no annotations

rifoxyc2_full_scaffold_1584_3
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(911..1387)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036BAF5F
HEPN Tax=CG_Aenigma_01
rifoxyc2_full_scaffold_1584_4
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(1359..1991)
DNA (633bp) protein (211aa)
hypothetical protein Tax=CG_Aenigma_01
id=5045782 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifoxyc2_full_scaffold_1584_5
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

comp(2439..3332)
DNA (894bp) protein (298aa)
thioredoxin-disulfide reductase (EC:1.8.1.9); K03387 alkyl hydroperoxide reductase subunit F [EC:1.6.4.-] Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
Thioredoxin-disulfide reductase (EC:1.8.1.9)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000360CB9F
rifoxyc2_full_scaffold_1584_6
unknown

Not on your lists

comp(3661..4488)
DNA (828bp) protein (276aa)

This feature has no annotations

rifoxyc2_full_scaffold_1584_7

Not on your lists

comp(4760..5554)
DNA (795bp) protein (265aa)
RNA-directed DNA polymerase id=5049170 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
RNA-directed DNA polymerase {ECO:0000313|EMBL:KHO45161.1}; Flags: Fragment;; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
RNA-directed DNA polymerase Reverse transcriptase
rifoxyc2_full_scaffold_1584_8
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5671..6672)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E1529
RNA-directed DNA polymerase Reverse transcriptase
serine/threonine protein kinase Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifoxyc2_full_scaffold_1584_9

Not on your lists

7012..7575
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000363549A
Uncharacterized protein {ECO:0000313|EMBL:KKK60898.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
tyrosine recombinase XerC-like protein
rifoxyc2_full_scaffold_1584_10
unknown

Not on your lists

7572..8837
DNA (1266bp) protein (422aa)

This feature has no annotations

rifoxyc2_full_scaffold_1584_11
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8923..9753)
DNA (831bp) protein (277aa)
hypothetical protein id=5050981 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c rbh
hypothetical protein Tax=AR18
hypothetical protein
rifoxyc2_full_scaffold_1584_12
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(9819..10607)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003613FF6
phage integrase family protein; K04763 integrase/recombinase XerD Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
hypothetical protein
rifoxyc2_full_scaffold_1584_13
unknown

Not on your lists

comp(10610..10999)
DNA (390bp) protein (130aa)

This feature has no annotations

rifoxyc2_full_scaffold_1584_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11508..11867
DNA (360bp) protein (120aa)
Protein containing Nucleotide binding protein, PINc domain n=1 Tax=sediment metagenome RepID=D9PJC5_9ZZZZ
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
rifoxyc2_full_scaffold_1584_15
unknown

Not on your lists

11864..12088
DNA (225bp) protein (75aa)

This feature has no annotations

rifoxyc2_full_scaffold_1584_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

12343..13587
DNA (1245bp) protein (415aa)
hypothetical protein; K07133 Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein; K07133 id=5048636 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifoxyc2_full_scaffold_1584_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13688..16000
DNA (2313bp) protein (771aa)
Hef nuclease; K10896 fanconi anemia group M protein Tax=CG_Woesearch_02
Hef nuclease id=5800171 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
DEAD/DEAH box helicase
rifoxyc2_full_scaffold_1584_18

Not on your lists

16067..16405
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HKT4_THES4
Uncharacterized protein {ECO:0000313|EMBL:KHO55178.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
hypothetical protein
rifoxyc2_full_scaffold_1584_19
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

16371..16928
DNA (558bp) protein (186aa)
nucleotidyltransferase n=1 Tax=Thermococcus zilligii RepID=UPI00029A3216
hypothetical protein Tax=CG_Pacearch_05
Nucleotidyltransferase
rifoxyc2_full_scaffold_1584_20
RBG_13_OP11_40_7b_curated, Microgenomates, Bacteria

Not on your lists

16999..17670
DNA (672bp) protein (224aa)
methyltransferase type 11 Tax=RBG_13_OP11_40_7b_curated
Methyltransferase id=15190153 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
methyltransferase
rifoxyc2_full_scaffold_1584_21
GWF2_CPR3_35_18, CPR3, Bacteria

Not on your lists

comp(17672..18259)
DNA (588bp) protein (196aa)
UMP/CMP kinase related protein id=4319973 bin=GWF2_CPR3_35_18 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=GWF2_CPR3_35_18 organism_group=CPR3
UMP/CMP kinase related protein {ECO:0000313|EMBL:KKP69303.1}; TaxID=1618350 species="Bacteria; candidate division CPR3.;" source="candidate division CPR3 bacterium GW2011_GWF2_35_18.;"
hypothetical protein
rifoxyc2_full_scaffold_1584_22
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(18261..18476)
DNA (216bp) protein (72aa)
Archaeal histone n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NG91_METST
archaeal histone Tax=CG_Pacearch_04
histone
rifoxyc2_full_scaffold_1584_23
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18540..19094)
DNA (555bp) protein (185aa)
Phospholipid-binding protein, PBP family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEI8_GEOUR
PEBP family protein
Phospholipid-binding protein, PBP family {ECO:0000313|EMBL:ABQ25843.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geob
rifoxyc2_full_scaffold_1584_24
GWA2_OP11_38_24, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

19198..19830
DNA (633bp) protein (211aa)
hypothetical protein Tax=GWA2_OP11_38_24
id=5043675 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifoxyc2_full_scaffold_1584_25
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

19818..20300
DNA (483bp) protein (161aa)
hypothetical protein
HEPN Tax=CG_Woesearch_01
HEPN id=5043676 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifoxyc2_full_scaffold_1584_26

Not on your lists

20532..21773
DNA (1242bp) protein (414aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos18C8 RepID=Q64DH7_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU82550.1}; TaxID=285411 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos18C8.;"
rifoxyc2_full_scaffold_1584_27
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

21922..22869
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035FCCF0
hypothetical protein; K06990 Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
rifoxyc2_full_scaffold_1584_28
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

22991..23251
DNA (261bp) protein (87aa)
transmembrane_regions Tax=CG_Woesearch_03
transmembrane_regions id=5044056 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Displaying 28 items

View Taxonomy