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rifoxyc1_full_scaffold_8275

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyc1_full_scaffold_8275_1
CG_Pacearch_01, Pacearchaeota, Archaea

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comp(1..762)
DNA (762bp) protein (254aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=CG_Pacearch_01
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=5044963 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Valine-tRNA ligase
rifoxyc1_full_scaffold_8275_2
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(759..1388)
DNA (630bp) protein (210aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RBG_13_Pacearchaeota_33_26_curated
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=5044963 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Suspect SCG annotation. See neighboring gene [rifoxyc1_full_scaffold_8275_1].
Valine-tRNA ligase
rifoxyc1_full_scaffold_8275_3
unknown

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comp(1373..1531)
DNA (159bp) protein (53aa)

This feature has no annotations

rifoxyc1_full_scaffold_8275_4

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1740..2069
DNA (330bp) protein (110aa)
Nascent polypeptide-associated complex protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GX70_METFV
Marine sediment metagenome DNA, contig: S01H1_S16720 {ECO:0000313|EMBL:GAG18767.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
nascent polypeptide associated complex nac
rifoxyc1_full_scaffold_8275_5

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2110..2580
DNA (471bp) protein (157aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S01H4_L06962 {ECO:0000313|EMBL:GAG84387.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
id=5103667 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifoxyc1_full_scaffold_8275_6
RIFOXYD1_FULL_WWE3_39_9_curated, WWE3, Bacteria

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2633..3073
DNA (441bp) protein (147aa)
hypothetical protein
id=5103666 Tax=RIFOXYD1_FULL_WWE3_39_9_curated
id=5103666 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifoxyc1_full_scaffold_8275_7
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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3094..3861
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037AEED3
cell division ATPase MinD; K03609 septum site-determining protein MinD Tax=RBG_13_Pacearchaeota_33_26_curated
cell division ATPase MinD
rifoxyc1_full_scaffold_8275_8
unknown

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comp(3997..4458)
DNA (462bp) protein (154aa)

This feature has no annotations

rifoxyc1_full_scaffold_8275_9
unknown

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comp(4505..4753)
DNA (249bp) protein (83aa)

This feature has no annotations

rifoxyc1_full_scaffold_8275_10
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(4750..5121)
DNA (372bp) protein (124aa)
PIN protein
PIN domain-containing protein Tax=RBG_13_Pacearchaeota_36_9_curated
Putative PIN domain protein id=4379347 bin=PER_GWC2_41_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifoxyc1_full_scaffold_8275_11
CG_Pacearch_03, Pacearchaeota, Archaea

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comp(5112..5330)
DNA (219bp) protein (73aa)
Tax=CG_Pacearch_03
rifoxyc1_full_scaffold_8275_12

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comp(5375..5704)
DNA (330bp) protein (110aa)
Methionyl-tRNA synthetase {ECO:0000313|EMBL:KHO55357.1}; EC=6.1.1.10 {ECO:0000313|EMBL:KHO55357.1};; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
protein containing C-terminal region/beta chain of methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BV09_ANAMD
Displaying 12 items

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