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rifoxyc1_full_scaffold_2201

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyc1_full_scaffold_2201_1
AR13, Pacearchaeaota, DPANN, Archaea

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2..301
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0X3_METPS id=5103071 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Putative uncharacterized protein Tax=AR13
rifoxyc1_full_scaffold_2201_2

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307..804
DNA (498bp) protein (166aa)
Marine sediment metagenome DNA, contig: S01H1_S24988 {ECO:0000313|EMBL:GAG22655.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein id=5044599 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifoxyc1_full_scaffold_2201_3
AR13, Pacearchaeaota, DPANN, Archaea

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comp(869..2320)
DNA (1452bp) protein (484aa)
type I restriction enzyme EcoKI M protein (EC:2.1.1.72)
DNA methyltransferase n=1 Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI0003645C1E
Type I restriction modification system,methyltransferase subunit Tax=AR13
rifoxyc1_full_scaffold_2201_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(2317..2832)
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos31B6 RepID=Q64AK8_9ARCH
Putative uncharacterized protein Tax=RBG_13_Pacearchaeota_36_9_curated
HEPN domain-containing protein
rifoxyc1_full_scaffold_2201_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(2833..3453)
DNA (621bp) protein (207aa)
Putative uncharacterized protein Tax=RBG_13_Pacearchaeota_36_9_curated
putative nucleotidyltransferase id=17439092 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
rifoxyc1_full_scaffold_2201_6
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3508..4695)
DNA (1188bp) protein (396aa)
Type I restriction-modification system, specificity subunit S {ECO:0000313|EMBL:AKB85408.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AKB85408.1};; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia;
Type 1 restriction-modification system specificity subunit n=1 Tax=Brachyspira hampsonii 30599 RepID=L8XL48_9SPIR
hypothetical protein
rifoxyc1_full_scaffold_2201_7
GWA1_OD1_36_12, Parcubacteria, Bacteria

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comp(4697..5374)
DNA (678bp) protein (226aa)
Tax=GWA1_OD1_36_12
rifoxyc1_full_scaffold_2201_8
unknown

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comp(5375..5758)
DNA (384bp) protein (128aa)

This feature has no annotations

rifoxyc1_full_scaffold_2201_9
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

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comp(5748..6155)
DNA (408bp) protein (136aa)
Tax=RBG_13_OP11_40_15_curated
rifoxyc1_full_scaffold_2201_10
unknown

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comp(6145..6531)
DNA (387bp) protein (129aa)

This feature has no annotations

rifoxyc1_full_scaffold_2201_11
unknown

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comp(6497..6880)
DNA (384bp) protein (128aa)

This feature has no annotations

rifoxyc1_full_scaffold_2201_12
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

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comp(7307..10129)
DNA (2823bp) protein (941aa)
type I site-specific deoxyribonuclease; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=Altiarchaeum hamiconexum
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2A3P8_9BACT
type I site-specific deoxyribonuclease
rifoxyc1_full_scaffold_2201_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(10099..10830)
DNA (732bp) protein (244aa)
DNA repair proteins n=1 Tax=uncultured archaeon GZfos29E12 RepID=Q64AS5_9ARCH
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RBG_13_Pacearchaeota_36_9_curated
radC; DNA repair protein RadC
Displaying 13 items

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