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08E140C01_scaffold_2952

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_scaffold_2952_1
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

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1..540
-----------------
DNA (540bp)
protein (180aa)
hypothetical protein, partial n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI00037B4978
Glutamate dehydrogenase
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_2952_2
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(606..1613)
-----------------
DNA (1008bp)
protein (336aa)
hypothetical protein id=9189 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_2952_3
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(1679..2467)
-----------------
DNA (789bp)
protein (263aa)
Pseudouridine synthase id=2188551 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
pseudouridylate synthase
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_2952_4
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(2472..3908)
-----------------
DNA (1437bp)
protein (479aa)
Polysaccharide biosynthesis protein id=2188549 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) rbh
heteropolysaccharide repeat-containing protein
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_2952_5
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

3980..4402
-----------------
DNA (423bp)
protein (141aa)
id=2188548 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_2952_6
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

4546..5787
-----------------
DNA (1242bp)
protein (414aa)
Transcription termination factor NusA id=1981218 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) rbh
NusA antitermination factor
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_2952_7
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

5814..7805
-----------------
DNA (1992bp)
protein (664aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump id=1327863 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_2952_8
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

7923..8354
-----------------
DNA (432bp)
protein (144aa)
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_2952_9
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(8424..8813)
-----------------
DNA (390bp)
protein (130aa)
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_2952_10
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

8970..10280
-----------------
DNA (1311bp)
protein (437aa)
Trigger factor id=1981225 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
trigger factor
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_2952_11
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

10249..10719
-----------------
DNA (471bp)
protein (157aa)
SsrA-binding protein id=1981229 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
smpB; ssrA RNA (tmRNA)-binding protein
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_2952_trna_1
unknown

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11125..11208
-----------------
DNA (84bp)
transferRNA
08E140C01_scaffold_2952_trna_2
unknown

Not on your lists

11294..11365
-----------------
DNA (72bp)
transferRNA
08E140C01_scaffold_2952_12
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(11427..11876)
-----------------
DNA (450bp)
protein (150aa)
N-acetylmuramoyl-L-alanine amidase id=68672 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
N-acetylmuramoyl-L-alanine amidase family protein
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_2952_13
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

12092..12646
-----------------
DNA (555bp)
protein (185aa)
Translation initiation factor IF-3 id=1816850 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
translation initiation factor 3
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_2952_14
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


12694..12891
-----------------
DNA (198bp)
protein (66aa)
50S ribosomal protein L35 id=1816851 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
rpmI; 50S ribosomal protein L35
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_2952_15
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


12919..13266
-----------------
DNA (348bp)
protein (116aa)
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 id=120654 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
50S ribosomal protein L20
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_2952_16
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

13270..13482
-----------------
DNA (213bp)
protein (71aa)
Preprotein translocase, SecG subunit id=1816853 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=BJP_08E140C01_OD1_43_7
Displaying 18 items

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