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08E140C01_scaffold_3970

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_scaffold_3970_1
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

2..400
DNA (399bp) protein (133aa)
Arginine--tRNA ligase id=1899329 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
argS; arginine--tRNA ligase
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_3970_2
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


424..1797
DNA (1374bp) protein (458aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K2FV52_9BACT rbh
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_3970_3
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

2003..2197
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CBH6_XANCA
hypothetical protein
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_3970_4
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

2315..3148
DNA (834bp) protein (278aa)
Competence-like protein id=2188514 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
beta-lactamase domain-containing protein
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_3970_5
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(3437..5257)
DNA (1821bp) protein (607aa)
Putative uncharacterized protein id=1816983 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) rbh
VanW family protein
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_3970_6
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(5263..5454)
DNA (192bp) protein (64aa)
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_3970_7
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(5456..5872)
DNA (417bp) protein (139aa)
Protein containing Heat shock protein Hsp20 domain id=1816986 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Small heat shock protein
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_3970_trna_2
unknown

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comp(5889..5962)
DNA (74bp)
transferRNA
08E140C01_scaffold_3970_trna_1
unknown

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comp(6014..6086)
DNA (73bp)
transferRNA
08E140C01_scaffold_3970_8
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(6113..7276)
DNA (1164bp) protein (388aa)
MgpA protein id=1816992 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
DHH family/DHHA1 domain protein
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_3970_9
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


7398..9182
DNA (1785bp) protein (595aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=131640 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
valS; valyl-tRNA synthetase
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_3970_10
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

9233..9991
DNA (759bp) protein (253aa)
Valyl-tRNA synthetase (EC:6.1.1.9)
Suspect SCG annotation. See neighboring gene [08E140C01_scaffold_3970_9].
Valine--tRNA ligase id=1899102 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_3970_11
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

10023..10379
DNA (357bp) protein (119aa)
id=1899097 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_3970_12
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


10385..11410
DNA (1026bp) protein (342aa)
Phenylalanyl-tRNA synthetase, alpha subunit n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NFX5_9LACT id=14078 bin=ACD18 species=Granulicatella adiacens genus=Granulicatella taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1 rbh
pheS; phenylalanyl-tRNA synthetase subunit alpha
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_3970_13
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

11415..13835
DNA (2421bp) protein (807aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit id=1899095 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_3970_14
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

13862..14197
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI0003770135
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_3970_15
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(14262..16487)
DNA (2226bp) protein (742aa)
DNA topoisomerase id=1899093 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) rbh
topA; DNA topoisomerase I
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_3970_16
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(16584..17465)
DNA (882bp) protein (294aa)
DNA protecting protein DprA n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVS6_HALNC
DNA protecting protein DprA
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_3970_17
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(17601..18155)
DNA (555bp) protein (185aa)
pth; aminoacyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase id=1899086 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_3970_18
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(18303..19694)
DNA (1392bp) protein (464aa)
GTPase Der id=1899083 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) rbh
engA; GTP-binding protein EngA
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_3970_19
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(19703..19831)
DNA (129bp) protein (43aa)
Tax=BJP_08E140C01_OD1_43_7
Displaying 21 items

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