ggKbase home page

08E140C01_scaffold_4226

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_scaffold_4226_1
CG_Falkow_03, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3..497)
DNA (495bp) protein (165aa)
translation elongation factor 2 (EF-2/EF-G); K02355 elongation factor G Tax=CG_Falkow_03
Elongation factor G id=1797401 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
translation elongation factor EF-G
08E140C01_scaffold_4226_2
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(528..995)
DNA (468bp) protein (156aa)
30S ribosomal protein S7 id=1797404 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
rpsG; 30S ribosomal protein S7
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_4226_3
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(1070..1495)
DNA (426bp) protein (142aa)
30S ribosomal protein S12 id=1797407 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S12
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_4226_4
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(1731..2360)
DNA (630bp) protein (210aa)
Peptidase M50 id=1797410 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_4226_5
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

2501..2755
DNA (255bp) protein (85aa)
Ribosomal_L28 3..55 id=8845 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_4226_6
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(2775..4256)
DNA (1482bp) protein (494aa)
ComEC/Rec2-related protein; K02238 competence protein ComEC id=8905 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
DNA internalization-related competence protein ComEC/Rec2
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_4226_7
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(4311..5426)
DNA (1116bp) protein (372aa)
Peptide chain release factor 2 n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z8Y6_DEHE1
prfB; peptide chain release factor 2, programmed frameshift
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_4226_8
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(5510..6004)
DNA (495bp) protein (165aa)
30S ribosomal protein S9 id=1987437 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S9
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_4226_9
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(6009..6365)
DNA (357bp) protein (119aa)
50S ribosomal protein L13 id=1987439 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
50S ribosomal protein L13
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_4226_10
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(6389..6739)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00036FABF8
rplQ; 50S ribosomal protein L17
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_4226_11
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(6767..7582)
DNA (816bp) protein (272aa)
DNA-directed RNA polymerase subunit alpha id=1987443 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
DNA-directed RNA polymerase subunit alpha, nonfunctional
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_4226_12
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(7665..8300)
DNA (636bp) protein (212aa)
30S ribosomal protein S4 id=1987445 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
rpsD; 30S ribosomal protein S4
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_4226_13
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(8323..8916)
DNA (594bp) protein (198aa)
30S ribosomal protein S11 id=1987447 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S11
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_4226_14
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(8952..9344)
DNA (393bp) protein (131aa)
30S ribosomal protein S13 id=1987449 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S13
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_4226_15
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(9563..9820)
DNA (258bp) protein (86aa)
Translation initiation factor IF-1 id=1987451 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
infA; translation initiation factor IF-1
Tax=BJP_08E140C01_OD1_43_7
Displaying 15 items

View Taxonomy