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GWB1_OD1_49_6_GWB1_scaffold_3686

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_OD1_49_6_GWB1_scaffold_3686_1
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

3..380
DNA (378bp) protein (126aa)
Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_3686_2
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

459..2135
DNA (1677bp) protein (559aa)
UniRef90_C3U0N5 Putative type II secretion system protein E n=1 Tax=uncultured bacterium RepID=C3U0N5_9BACT id=133266 bin=ACD81 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
pilB1; type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=GWB1_OD1_49_6_curated
pilB1; type IV-A pilus assembly ATPase PilB
GWB1_OD1_49_6_GWB1_scaffold_3686_3
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

2406..3410
DNA (1005bp) protein (335aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4); K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=GWB1_OD1_49_6_curated
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
tjr:TherJR_1182 Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB id=3134 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
GWB1_OD1_49_6_GWB1_scaffold_3686_4
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

3416..3961
DNA (546bp) protein (182aa)
nucleic acid binding OB-fold tRNA/helicase-type Tax=GWB1_OD1_49_6_curated
nucleic acid binding OB-fold tRNA/helicase-type id=15189338 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
GWB1_OD1_49_6_GWB1_scaffold_3686_5
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

3912..4367
DNA (456bp) protein (152aa)
ATPase YjeE protein Tax=GWB1_OD1_49_6_curated
hypothetical protein; K06925 id=133989 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
ATPase YjeE protein
GWB1_OD1_49_6_GWB1_scaffold_3686_6
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

4617..5516
DNA (900bp) protein (300aa)
Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_3686_7
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(5650..6336)
DNA (687bp) protein (229aa)
Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_3686_8
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

6776..8956
DNA (2181bp) protein (727aa)
DNA polymerase I, thermostable; K02335 DNA polymerase I [EC:2.7.7.7] Tax=GWB1_OD1_49_6_curated
DNA polymerase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EPJ5_9FIRM
DNA polymerase I, thermostable
GWB1_OD1_49_6_GWB1_scaffold_3686_9
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

8957..10291
DNA (1335bp) protein (445aa)
multi-sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=GWB1_OD1_49_6_curated
PAS domain S-box protein id=15190590 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
multi-sensor signal transduction histidine kinase
GWB1_OD1_49_6_GWB1_scaffold_3686_10

Not on your lists

10384..12027
DNA (1644bp) protein (548aa)
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=uncultured bacterium RepID=K2F4C4_9BACT
CTP synthetase {ECO:0000313|EMBL:KKW16861.1}; TaxID=1618798 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_50_14.;"
GWB1_OD1_49_6_GWB1_scaffold_3686_11
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

12042..12848
DNA (807bp) protein (269aa)
Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_3686_12
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

12845..13240
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Prevotella oralis CC98A RepID=V8BW24_9BACT
hypothetical protein Tax=GWB1_OD1_49_6_curated
hypothetical protein
GWB1_OD1_49_6_GWB1_scaffold_3686_13
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists


comp(13266..13520)
DNA (255bp) protein (85aa)
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=GWB1_OD1_49_6_curated
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 id=15189999 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
30S ribosomal protein S20
GWB1_OD1_49_6_GWB1_scaffold_3686_14
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

13999..14205
DNA (207bp) protein (69aa)
Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_3686_15
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(14272..14643)
DNA (372bp) protein (124aa)
Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_3686_16
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

14993..16339
DNA (1347bp) protein (449aa)
RNA-metabolising metallo-beta-lactamase; K07576 metallo-beta-lactamase family protein Tax=GWB1_OD1_49_6_curated
amt:Amet_0777 RNA-metabolising metallo-beta-lactamase; K07576 metallo-beta-lactamase family protein id=133276 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Beta-Casp domain containing protein
GWB1_OD1_49_6_GWB1_scaffold_3686_17
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

16352..16972
DNA (621bp) protein (207aa)
hypothetical protein Tax=GWB1_OD1_49_6_curated
Putative uncharacterized protein id=4731754 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
GWB1_OD1_49_6_GWB1_scaffold_3686_18
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

16974..17270
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVD3_9BACT
hypothetical protein Tax=GWB1_OD1_49_6_curated
Translation elongation factor-like protein
GWB1_OD1_49_6_GWB1_scaffold_3686_19
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

17280..18383
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035FC8C5
hypothetical protein Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_3686_20
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

18460..18732
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A4N2_9BACT
excinuclease ABC subunit C; K07461 putative endonuclease Tax=GWB1_OD1_49_6_curated
excinuclease ABC subunit C
GWB1_OD1_49_6_GWB1_scaffold_3686_trna_1
unknown

Not on your lists

18723..18794
DNA (72bp)
transferRNA
GWB1_OD1_49_6_GWB1_scaffold_3686_21
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

18868..19398
DNA (531bp) protein (177aa)
id=5096059 Tax=GWB1_OD1_49_6_curated
id=5096059 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
GWB1_OD1_49_6_GWB1_scaffold_3686_22
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

19352..20044
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D982_9BACT
Uncharacterized protein Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_3686_23
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

20136..20819
DNA (684bp) protein (228aa)
Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_3686_24
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

20952..21488
DNA (537bp) protein (179aa)
id=4838808 Tax=GWB1_OD1_49_6_curated
id=4838808 bin=GWC2_OD1_43_27 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
GWB1_OD1_49_6_GWB1_scaffold_3686_25
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

21496..22116
DNA (621bp) protein (207aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=GWB1_OD1_49_6_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036739CA
phage SPO1 DNA polymerase-like protein
GWB1_OD1_49_6_GWB1_scaffold_3686_26
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

22271..22648
DNA (378bp) protein (126aa)
transmembrane_regions Tax=GWB1_OD1_49_6_curated
transmembrane_regions id=5801543 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
GWB1_OD1_49_6_GWB1_scaffold_3686_27
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

22645..25188
DNA (2544bp) protein (848aa)
chaperone ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=GWB1_OD1_49_6_curated
chaperone ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC id=15189845 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
chaperone ATPase
GWB1_OD1_49_6_GWB1_scaffold_3686_28
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

25203..25859
DNA (657bp) protein (219aa)
hypothetical protein Tax=GWB1_OD1_49_6_curated
hypothetical protein id=15189841 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
GWB1_OD1_49_6_GWB1_scaffold_3686_29
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

25864..27606
DNA (1743bp) protein (581aa)
PHP domain-containing protein; K02347 DNA polymerase (family X) Tax=GWB1_OD1_49_6_curated
nis:NIS_1287 family X DNA polymerase IV; K02347 DNA polymerase (family X) id=133327 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
PHP domain-containing protein
Displaying items 1-30 of 35 in total

View Taxonomy