ggKbase home page

GWB1_OP11_37_5_GWB1_scaffold_2329

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_OP11_37_5_GWB1_scaffold_2329_1

Not on your lists

comp(2..931)
DNA (930bp) protein (310aa)
Integrase n=2 Tax=Yersinia RepID=C4U858_YERAL id=75820 bin=ACD52 species=unknown genus=Yersinia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Integrase {ECO:0000313|EMBL:EKD61989.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
integrase core domain protein
GWB1_OP11_37_5_GWB1_scaffold_2329_trna_1
unknown

Not on your lists

1169..1253
DNA (85bp)
transferRNA
GWB1_OP11_37_5_GWB1_scaffold_2329_2
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

1492..2442
DNA (951bp) protein (317aa)
dmt; dolichol-phosphate mannosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase id=4419257 bin=GWC2_Deltaproteobacteria_56_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
dmt; dolichol-phosphate mannosyltransferase
GWB1_OP11_37_5_GWB1_scaffold_2329_3
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

2454..4331
DNA (1878bp) protein (626aa)
Glycosyltransferase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6R6_METCZ
Glycosyltransferase Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
glycosyltransferase
GWB1_OP11_37_5_GWB1_scaffold_2329_4
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

4328..5902
DNA (1575bp) protein (525aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
hypothetical protein id=24610522 bin=RAAC11 species=Desulfococcus multivorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
putative membrane protein (DUF2079)
GWB1_OP11_37_5_GWB1_scaffold_2329_5
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

5941..6840
DNA (900bp) protein (300aa)
Sulfotransferase n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RED4_METVM
sulfotransferase Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
sulfotransferase
GWB1_OP11_37_5_GWB1_scaffold_2329_6
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

6837..8141
DNA (1305bp) protein (435aa)
transmembrane_regions 10..28 Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
transmembrane_regions 10..28 id=35509 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
GWB1_OP11_37_5_GWB1_scaffold_2329_7
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

8146..9357
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DQ64_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
GWB1_OP11_37_5_GWB1_scaffold_2329_8
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

9335..10897
DNA (1563bp) protein (521aa)
membrane protein of unknown function Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
hypothetical protein id=71933 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
membrane protein of unknown function
GWB1_OP11_37_5_GWB1_scaffold_2329_9
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

10957..12762
DNA (1806bp) protein (602aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
DNA primase n=1 Tax=uncultured bacterium RepID=K2ERQ8_9BACT
hypothetical protein
GWB1_OP11_37_5_GWB1_scaffold_2329_10
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

12764..13843
DNA (1080bp) protein (360aa)
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
dae:Dtox_3036 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor id=6881 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
RpoD subfamily RNA polymerase sigma-70 subunit
GWB1_OP11_37_5_GWB1_scaffold_2329_11
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

13869..15050
DNA (1182bp) protein (394aa)
Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
GWB1_OP11_37_5_GWB1_scaffold_2329_12
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

15289..15855
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BWF9_9BACT
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
hypothetical protein
GWB1_OP11_37_5_GWB1_scaffold_2329_13
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

15845..17074
DNA (1230bp) protein (410aa)
transmembrane_regions 193..215 Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
transmembrane_regions 193..215 id=28134 bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
GWB1_OP11_37_5_GWB1_scaffold_2329_14
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(17040..17315)
DNA (276bp) protein (92aa)
cold-inducible RNA-binding protein (EC:1.4.3.6) Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
rnp-1 like RNA-binding protein id=5098363 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
RNP-1 like RNA-binding protein
GWB1_OP11_37_5_GWB1_scaffold_2329_15
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(17430..17816)
DNA (387bp) protein (129aa)
seg 82..95 Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
seg 82..95 id=75763 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
GWB1_OP11_37_5_GWB1_scaffold_2329_16
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

17880..17981
DNA (102bp) protein (34aa)
cell envelope-related transcriptional attenuator Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
Displaying 17 items

View Taxonomy