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RBG_13_KAZAN_50_9_RBG_13_scaffold_306_11

Organism: candidate division Kazan bacterium RBG_13_50_9

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 ASCG 10 / 38
Location: comp(8638..10425)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TIZ7_CALOO similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 430.0
  • Bit_score: 327
  • Evalue 2.70e-86
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RBG_13_KAZAN_50_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 595.0
  • Bit_score: 1185
  • Evalue 0.0
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 430.0
  • Bit_score: 327
  • Evalue 7.60e-87

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Taxonomy

RBG_13_KAZAN_50_9_curated → Kazan → Bacteria

Sequences

DNA sequence
Length: 1788
ATGGAGCGGCTCGTACTCAACCCTGAAGGACACCCTAATATTAGTGGGGGAGAAACAGTAGACGAGTCCAAGCTTGGCATAGGTGGTGGAGAGGATCTTGGTTCTGGTGGCAGCCAGGTAGATGGGCATAAAGGTAGAGCCGATTTTCTTAAGTCCCCTAATCCTCGAGATTATCCGGAGGCAGTGGTAGTGCCGGGTGAAGATGAGTGGTTGTCCTTTGCTCAGCTGTATGGAGCTTTACGGATGGATTACCCTAAGCTGCGCAAAGAGGATATGCAGGTTCTTTTAAGAAAGGCCGTTAGACAATGCCCCGGTGGCTGTCGGGTCTTTCGCCAGCCAGTTGCTAGGCACGTTGGCTGGTATTTTGATTTCGAAGTTTATAACGCTATATTTGAGGCGCTGGAGCGCTCTGGTGGAAGAGTAAGTAACTCAAAGCAGAGTCGGAAGGAAGCTCACTATGGCGGCCGGGCCAAGGGTATTATCCAAAAAGCGGGCGAGGGCAGTAAATTAACTGATGAGGCGACAAAGAAGAGGGCGGGTCAGCAGAAAGAGGGACTGTTGTCAGTCAGAAAACCTGCTCCTAGGAAGAGGGTTCCCAGGGTCATGCGGGTTCCGTCAGAGATCGACGGTTTGCTAACGGAGGCTCATTACGCCCAAATTGAAGCGGTTGCTGCTTATGAAGGTTGGATATCCAGCGACGAACTGTGGGACATCCTCGATAAGGTCAAAGGATTTGGCGCAGAACATCTTGATGCTCTGTTGGAGGATCTGGATAGCCGCGGCGTGAAAGTGGTAGTGACAGAGTCGGATGAACTTGAGCCGAGTATCGAGCCGGACGACCGCGAAGAGAGAGTAGTAAAAAGAGAGGTCTCCCAAGAGGAGCTGGATGCTCAAAAGCTTAGGCTTGATGACGCGGTGAAGCATTGGCTAAAGGTAGCGGGCAGTATCCCCCTGCTGATGCCGGCAGAAGAAATTTACTGGGCTAAGCGTTATCGGGCGGGGGATCTCGTTGCCAAGCAGAAGTTAATTGAAGCCAATTTCCGGCTGGTGATCAGTATCGCTAAGAAATATCTTAATAGGGGGATGTTGTTTCTGGATCTGATCCAGGAAGGCAACATTGGCTTGATCAGGGCAGTGGAGAAGTTTGATCTGGACCGGGGCTTTAAACTTTCGACCTACGCCACTTGGTGGATCCGTCAGGCGATCAGCCGGGCCCTGGCCGATCAAGCTGAATTAGTAAGGAAACCGGTGCATATGGTGGAGACGATATCCAAGCTAGGAAGAGGGTCGAAAGATTTTCAGCAGGAGCACGATAGAGAACCAACCCGGCAGGAGTTAGCGAACAAGCTGGGCTGGTCTATTGTAGAAGTAGAAAAGGTTTTGCGCGCGGCTCAAAAACCCATTTCTTTAGAAAAACCAGTTGGCGATAAGAAGGCTGGCCACGACTCTACTACCTTTGGTGAGCTGCAGCCCGACCCTTGGGCAATGAGCCCCGAGGTGGAAGCCTTCTACAGAGTGGCGCAAGAGCGCTTGGCTGCCATCTTAGCTACTCTACAGCCTCGAGAAGCAGCGATCTTGCAAATGCGGTTTGGGGTGGGAGATGACCGTAGCCACACTTTAGAGGAGGTGGGGCGGCAATTTAATGTTACGAGAGAGCGCATCCGACAGATTGAGAAGAAGGCTCTAAAGAAGTTGGGGCGCCCATCCCGGCGGCGGTGGATGGTGGGCTTAGTTGAAGCCTGCGAGGAATACGCCACAGCGTTAGCAGGGGCGGATTACAAGAGCTAA
PROTEIN sequence
Length: 596
MERLVLNPEGHPNISGGETVDESKLGIGGGEDLGSGGSQVDGHKGRADFLKSPNPRDYPEAVVVPGEDEWLSFAQLYGALRMDYPKLRKEDMQVLLRKAVRQCPGGCRVFRQPVARHVGWYFDFEVYNAIFEALERSGGRVSNSKQSRKEAHYGGRAKGIIQKAGEGSKLTDEATKKRAGQQKEGLLSVRKPAPRKRVPRVMRVPSEIDGLLTEAHYAQIEAVAAYEGWISSDELWDILDKVKGFGAEHLDALLEDLDSRGVKVVVTESDELEPSIEPDDREERVVKREVSQEELDAQKLRLDDAVKHWLKVAGSIPLLMPAEEIYWAKRYRAGDLVAKQKLIEANFRLVISIAKKYLNRGMLFLDLIQEGNIGLIRAVEKFDLDRGFKLSTYATWWIRQAISRALADQAELVRKPVHMVETISKLGRGSKDFQQEHDREPTRQELANKLGWSIVEVEKVLRAAQKPISLEKPVGDKKAGHDSTTFGELQPDPWAMSPEVEAFYRVAQERLAAILATLQPREAAILQMRFGVGDDRSHTLEEVGRQFNVTRERIRQIEKKALKKLGRPSRRRWMVGLVEACEEYATALAGADYKS*