ggKbase home page

RBG_13_KAZAN_50_9_RBG_13_scaffold_306

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_1
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(3..728)
DNA (726bp) protein (242aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RBG_13_KAZAN_50_9_curated
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase id=3239573 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_2
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

1569..2603
DNA (1035bp) protein (345aa)
adenylosuccinate lyase Tax=RBG_13_KAZAN_50_9_curated
hypothetical protein id=5801788 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
adenylosuccinate lyase
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_3
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

2603..2866
DNA (264bp) protein (88aa)
Tax=RBG_13_KAZAN_50_9_curated
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_4
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(2944..3429)
DNA (486bp) protein (162aa)
Tax=RBG_13_KAZAN_50_9_curated
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_5
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(3410..4195)
DNA (786bp) protein (262aa)
hypothetical protein Tax=RBG_13_KAZAN_50_9_curated
Putative uncharacterized protein id=2438318 bin=GWA1_Kazan_50_15 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
hypothetical protein
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_6
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(4257..5267)
DNA (1011bp) protein (337aa)
s-adenosylmethionine synthetase; K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RBG_13_KAZAN_50_9_curated
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase id=2329578 bin=GWD1_TM7_39_7 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_7
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(5487..5984)
DNA (498bp) protein (166aa)
Spore germination protein-like protein Tax=RBG_13_KAZAN_50_9_curated
Spore germination protein-like protein id=2438015 bin=GWA1_Kazan_50_15 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_8
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(5995..6687)
DNA (693bp) protein (231aa)
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RBG_13_KAZAN_50_9_curated
tRNA pseudouridine synthase B id=1816798 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
pseudouridine synthase
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_9
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(6687..7826)
DNA (1140bp) protein (380aa)
hypothetical protein Tax=RBG_13_KAZAN_50_9_curated
hypothetical protein id=73786 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
hypothetical protein
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_10
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(7899..8603)
DNA (705bp) protein (235aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RBG_13_KAZAN_50_9_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000362AC96
hypothetical protein
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_11
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(8638..10425)
DNA (1788bp) protein (596aa)
RNA polymerase sigma factor SigA n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TIZ7_CALOO
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RBG_13_KAZAN_50_9_curated
RpoD subfamily RNA polymerase sigma-70 subunit
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_12
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(10505..10861)
DNA (357bp) protein (119aa)
Tax=RBG_13_KAZAN_50_9_curated
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_13
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

10934..11500
DNA (567bp) protein (189aa)
Tax=RBG_13_KAZAN_50_9_curated
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_14
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

11509..12291
DNA (783bp) protein (261aa)
Acetylglutamate kinase n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N578_9ARCH
aspartate/glutamate/uridylate kinase; K06981 Tax=RBG_13_KAZAN_50_9_curated
acetylglutamate kinase
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_15
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(12348..12866)
DNA (519bp) protein (173aa)
Tax=RBG_13_KAZAN_50_9_curated
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_16
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(12872..13120)
DNA (249bp) protein (83aa)
Tax=RBG_13_KAZAN_50_9_curated
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_17
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

13183..13278
DNA (96bp) protein (32aa)
Tax=RBG_13_KAZAN_50_9_curated
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_18
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(13272..13682)
DNA (411bp) protein (137aa)
id=2436997 Tax=RBG_13_KAZAN_50_9_curated
id=2436997 bin=GWA1_Kazan_50_15 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_19
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(13713..14390)
DNA (678bp) protein (226aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Corynebacterium glucuronolyticum ATCC 51867 RepID=C0VW83_9CORY
hydrolase Tax=RBG_13_KAZAN_50_9_curated
haloacid dehalogenase
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_20
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(14387..15289)
DNA (903bp) protein (301aa)
UDP-N-acetylglucosamine-N-acetylmuramyl-pentapeptide pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227) Tax=RBG_13_KAZAN_50_9_curated
murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG (EC:2.4.1.227)
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase n=3 Tax=Roseburia intestinalis RepID=C7G5S0_9FIRM id=88766 bin=ACD5 species=Roseburia intestinalis genus=Roseburia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_21
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(15363..16565)
DNA (1203bp) protein (401aa)
FtsW; cell division membrane protein; K03588 cell division protein FtsW Tax=RBG_13_KAZAN_50_9_curated
Stage V sporulation protein E id=3239582 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
FtsW; cell division membrane protein
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_22
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(16566..17942)
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=RBG_13_KAZAN_50_9_curated
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase id=2438008 bin=GWA1_Kazan_50_15 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_23
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(18092..18793)
DNA (702bp) protein (234aa)
Tax=RBG_13_KAZAN_50_9_curated
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_24
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(18914..20224)
DNA (1311bp) protein (437aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=RBG_13_KAZAN_50_9_curated
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CPG7_SYNLT
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_25
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(20246..20518)
DNA (273bp) protein (91aa)
Putative uncharacterized protein Tax=RBG_13_KAZAN_50_9_curated
Putative uncharacterized protein id=3239608 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_26
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(20545..21264)
DNA (720bp) protein (240aa)
Tax=RBG_13_KAZAN_50_9_curated
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_27
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(21480..22061)
DNA (582bp) protein (194aa)
Tax=RBG_13_KAZAN_50_9_curated
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_28
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(22195..23061)
DNA (867bp) protein (289aa)
Tax=RBG_13_KAZAN_50_9_curated
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_29
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(23661..24716)
DNA (1056bp) protein (352aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide transferase (EC:2.7.8.13) Tax=RBG_13_KAZAN_50_9_curated
Phospho-N-acetylmuramoyl-pentapeptide-transferase id=2438030 bin=GWA1_Kazan_50_15 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
phospho-N-acetylmuramoyl-pentapeptide-transferase
RBG_13_KAZAN_50_9_RBG_13_scaffold_306_30
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

Not on your lists

comp(24941..26176)
DNA (1236bp) protein (412aa)
UDP-N-acetylmuramyl pentapeptide synthase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RBG_13_KAZAN_50_9_curated
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase id=3239599 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
murF; UDP-N-acetylmuramylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
Displaying items 1-30 of 69 in total

View Taxonomy